RNA–Protein interactions for RNA: ENST00000524850.5

ABCA7-205, Transcript of ATP binding cassette subfamily A member 7, human

TSL 4

Gene ABCA7, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-205	ENST00000524850	MT1G	P13640	62 aa		6.37	□□□□□ -1.39
ABCA7-205	ENST00000524850		K7ERS5	55 aa		6.33	□□□□□ -1.4
ABCA7-205	ENST00000524850	PCP4	P48539	62 aa		6.33	□□□□□ -1.4
ABCA7-205	ENST00000524850	MT1L	Q93083	61 aa		6.33	□□□□□ -1.4
ABCA7-205	ENST00000524850	PP632	Q6XCG6	107 aa		6.3	□□□□□ -1.4
ABCA7-205	ENST00000524850	RPS28	P62857	69 aa	Known RBP	6.29	□□□□□ -1.4
ABCA7-205	ENST00000524850	KRTAP4-9	Q9BYQ8	210 aa		6.29	□□□□□ -1.4
ABCA7-205	ENST00000524850	KRTAP25-1	Q3LHN0	102 aa		6.26	□□□□□ -1.41
ABCA7-205	ENST00000524850	MT1M	Q8N339	61 aa		6.26	□□□□□ -1.41
ABCA7-205	ENST00000524850		A6NED7	52 aa		6.25	□□□□□ -1.41
ABCA7-205	ENST00000524850	KRTAP12-3	P60328	96 aa		6.21	□□□□□ -1.42
ABCA7-205	ENST00000524850	HMCN1	Q96RW7	5635 aa		6.19	□□□□□ -1.42
ABCA7-205	ENST00000524850	LCE1D	Q5T752	114 aa		6.14	□□□□□ -1.43
ABCA7-205	ENST00000524850	KRTAP4-3	Q9BYR4	195 aa		6.1	□□□□□ -1.43
ABCA7-205	ENST00000524850	LCE4A	Q5TA78	99 aa		6.08	□□□□□ -1.44
ABCA7-205	ENST00000524850	KRTAP23-1	A1A580	65 aa		6.05	□□□□□ -1.44
ABCA7-205	ENST00000524850	MT4	P47944	62 aa		6.05	□□□□□ -1.44
ABCA7-205	ENST00000524850	CDC42SE1	Q9NRR8	79 aa		6.03	□□□□□ -1.44
ABCA7-205	ENST00000524850	AHNAK2	Q8IVF2	5795 aa		6.03	□□□□□ -1.44
ABCA7-205	ENST00000524850	KRTAP4-7	Q9BYR0	210 aa		6.01	□□□□□ -1.45
ABCA7-205	ENST00000524850	ROMO1	P60602	79 aa		5.95	□□□□□ -1.46
ABCA7-205	ENST00000524850	KRTAP5-4	Q6L8H1	288 aa		5.92	□□□□□ -1.46
ABCA7-205	ENST00000524850	KRTAP19-4	Q3LI73	84 aa		5.89	□□□□□ -1.47
ABCA7-205	ENST00000524850	KRTAP15-1	Q3LI76	137 aa		5.86	□□□□□ -1.47
ABCA7-205	ENST00000524850	KRTAP4-6	Q9BYQ5	205 aa		5.83	□□□□□ -1.48
ABCA7-205	ENST00000524850	KRTAP5-10	Q6L8G5	202 aa		5.82	□□□□□ -1.48
ABCA7-205	ENST00000524850	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.75	□□□□□ -1.49
ABCA7-205	ENST00000524850	LCE3C	Q5T5A8	94 aa		5.74	□□□□□ -1.49
ABCA7-205	ENST00000524850	LOC100996750	A0A140TA64	210 aa		5.69	□□□□□ -1.5
ABCA7-205	ENST00000524850	KRTAP5-3	Q6L8H2	238 aa		5.63	□□□□□ -1.51
ABCA7-205	ENST00000524850	KRTAP5-7	Q6L8G8	165 aa		5.62	□□□□□ -1.51
ABCA7-205	ENST00000524850	KRTAP20-2	Q3LI61	65 aa		5.61	□□□□□ -1.51
ABCA7-205	ENST00000524850	SPRR5	A0A1B0GTR4	108 aa		5.57	□□□□□ -1.52
ABCA7-205	ENST00000524850	KRTAP12-4	P60329	112 aa		5.53	□□□□□ -1.52
ABCA7-205	ENST00000524850	BRK1	Q8WUW1	75 aa		5.52	□□□□□ -1.53
ABCA7-205	ENST00000524850	SYNE1	Q8NF91	8797 aa	Known RBP	5.51	□□□□□ -1.53
ABCA7-205	ENST00000524850	KRTAP9-6	A8MVA2	160 aa		5.43	□□□□□ -1.54
ABCA7-205	ENST00000524850	MT1A	P04731	61 aa		5.39	□□□□□ -1.55
ABCA7-205	ENST00000524850	KRTAP6-1	Q3LI64	71 aa		5.35	□□□□□ -1.55
ABCA7-205	ENST00000524850	KRTAP5-2	Q701N4	177 aa		5.2	□□□□□ -1.58
ABCA7-205	ENST00000524850	PMAIP1	Q13794	54 aa		5.19	□□□□□ -1.58
ABCA7-205	ENST00000524850	KRTAP9-4	Q9BYQ2	154 aa		5.19	□□□□□ -1.58
ABCA7-205	ENST00000524850	KRTAP4-11	Q9BYQ6	195 aa		5.18	□□□□□ -1.58
ABCA7-205	ENST00000524850	AHNAK	Q09666	5890 aa	Known RBP	5.13	□□□□□ -1.59
ABCA7-205	ENST00000524850	KRTAP6-2	Q3LI66	62 aa		5.06	□□□□□ -1.6
ABCA7-205	ENST00000524850	MUC5AC	P98088	5654 aa		5.04	□□□□□ -1.6
ABCA7-205	ENST00000524850	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.03	□□□□□ -1.6
ABCA7-205	ENST00000524850	KRTAP5-8	O75690	187 aa		5	□□□□□ -1.61
ABCA7-205	ENST00000524850	PRAC1	Q96KF2	57 aa		4.99	□□□□□ -1.61
ABCA7-205	ENST00000524850	PRO0628	Q9UI54	55 aa		4.93	□□□□□ -1.62
ABCA7-205	ENST00000524850	MT3	P25713	68 aa		4.91	□□□□□ -1.62
ABCA7-205	ENST00000524850	OBSCN	Q5VST9	7968 aa		4.88	□□□□□ -1.63
ABCA7-205	ENST00000524850	KRTAP9-9	Q9BYP9	154 aa		4.8	□□□□□ -1.64
ABCA7-205	ENST00000524850	KTN1-AS1	Q86SY8	53 aa		4.69	□□□□□ -1.66
ABCA7-205	ENST00000524850	KRTAP5-1	Q6L8H4	278 aa		4.65	□□□□□ -1.67
ABCA7-205	ENST00000524850	LCE1E	Q5T753	118 aa		4.48	□□□□□ -1.69
ABCA7-205	ENST00000524850	SVIP	Q8NHG7	77 aa		4.46	□□□□□ -1.7
ABCA7-205	ENST00000524850	KRTAP4-2	Q9BYR5	136 aa		4.23	□□□□□ -1.73
ABCA7-205	ENST00000524850	LCE1B	Q5T7P3	118 aa		4.18	□□□□□ -1.74
ABCA7-205	ENST00000524850	LUZP6	Q538Z0	58 aa		4.17	□□□□□ -1.74
ABCA7-205	ENST00000524850	LCE1C	Q5T751	118 aa		4.16	□□□□□ -1.74
ABCA7-205	ENST00000524850	LCE3D	Q9BYE3	92 aa		4.16	□□□□□ -1.74
ABCA7-205	ENST00000524850	LCE3E	Q5T5B0	92 aa		3.95	□□□□□ -1.78
ABCA7-205	ENST00000524850	KRTAP4-12	Q9BQ66	201 aa		3.83	□□□□□ -1.8
ABCA7-205	ENST00000524850	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.82	□□□□□ -1.8
ABCA7-205	ENST00000524850	KRTAP5-11	Q6L8G4	156 aa		3.77	□□□□□ -1.81
ABCA7-205	ENST00000524850	LCE1F	Q5T754	118 aa		3.66	□□□□□ -1.82
ABCA7-205	ENST00000524850	KRTAP21-2	Q3LI59	83 aa		3.52	□□□□□ -1.85
ABCA7-205	ENST00000524850	NDUFAF8	A1L188	74 aa		3.46	□□□□□ -1.86
ABCA7-205	ENST00000524850	PHGR1	C9JFL3	82 aa		3.42	□□□□□ -1.86
ABCA7-205	ENST00000524850	KRTAP4-4	Q9BYR3	166 aa		3.18	□□□□□ -1.9
ABCA7-205	ENST00000524850	PRM1	P04553	51 aa		3.05	□□□□□ -1.92
ABCA7-205	ENST00000524850	MUC19	Q7Z5P9	8384 aa		3.03	□□□□□ -1.92
ABCA7-205	ENST00000524850	INE1	O15225	51 aa		2.8	□□□□□ -1.96
ABCA7-205	ENST00000524850		A0A0A0MQY5	61 aa		2.76	□□□□□ -1.97
ABCA7-205	ENST00000524850	KRTAP21-1	Q3LI58	79 aa		2.6	□□□□□ -1.99
ABCA7-205	ENST00000524850	MUC16	Q8WXI7	14507 aa		2.15	□□□□□ -2.07
ABCA7-205	ENST00000524850		H3BS24	57 aa		2.08	□□□□□ -2.08

Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms