RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
LDLRAD3-202ENST00000524419 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
LDLRAD3-202ENST00000524419 INE1O15225 51 aa4.88□□□□□ -1.63
LDLRAD3-202ENST00000524419 MT1EP04732 61 aa4.88□□□□□ -1.63
LDLRAD3-202ENST00000524419 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
LDLRAD3-202ENST00000524419 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
LDLRAD3-202ENST00000524419 KRTAP20-1Q3LI63 56 aa4.85□□□□□ -1.63
LDLRAD3-202ENST00000524419 MT1LQ93083 61 aa4.84□□□□□ -1.63
LDLRAD3-202ENST00000524419 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
LDLRAD3-202ENST00000524419 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
LDLRAD3-202ENST00000524419 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
LDLRAD3-202ENST00000524419 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
LDLRAD3-202ENST00000524419 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
LDLRAD3-202ENST00000524419 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
LDLRAD3-202ENST00000524419 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
LDLRAD3-202ENST00000524419 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
LDLRAD3-202ENST00000524419 SPRR2FQ96RM1 72 aa4.6□□□□□ -1.67
LDLRAD3-202ENST00000524419 MT1GP13640 62 aa4.59□□□□□ -1.67
LDLRAD3-202ENST00000524419 SPRR2EP22531 72 aa4.59□□□□□ -1.67
LDLRAD3-202ENST00000524419 SPRR2BP35325 72 aa4.59□□□□□ -1.67
LDLRAD3-202ENST00000524419 SPRR2AP35326 72 aa4.59□□□□□ -1.67
LDLRAD3-202ENST00000524419 MT1MQ8N339 61 aa4.58□□□□□ -1.68
LDLRAD3-202ENST00000524419 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
LDLRAD3-202ENST00000524419 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
LDLRAD3-202ENST00000524419 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
LDLRAD3-202ENST00000524419 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
LDLRAD3-202ENST00000524419 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
LDLRAD3-202ENST00000524419 SPRR2DP22532 72 aa4.45□□□□□ -1.7
LDLRAD3-202ENST00000524419 LCE3BQ5TA77 95 aa4.34□□□□□ -1.71
LDLRAD3-202ENST00000524419 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
LDLRAD3-202ENST00000524419 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
LDLRAD3-202ENST00000524419 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
LDLRAD3-202ENST00000524419 MT1AP04731 61 aa4.1□□□□□ -1.75
LDLRAD3-202ENST00000524419 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
LDLRAD3-202ENST00000524419 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
LDLRAD3-202ENST00000524419 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
LDLRAD3-202ENST00000524419 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
LDLRAD3-202ENST00000524419 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
LDLRAD3-202ENST00000524419 LCE4AQ5TA78 99 aa3.94□□□□□ -1.78
LDLRAD3-202ENST00000524419 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
LDLRAD3-202ENST00000524419 MT4P47944 62 aa3.87□□□□□ -1.79
LDLRAD3-202ENST00000524419 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
LDLRAD3-202ENST00000524419 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
LDLRAD3-202ENST00000524419 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
LDLRAD3-202ENST00000524419 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
LDLRAD3-202ENST00000524419 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
LDLRAD3-202ENST00000524419 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
LDLRAD3-202ENST00000524419 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
LDLRAD3-202ENST00000524419 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
LDLRAD3-202ENST00000524419 MT3P25713 68 aa3.69□□□□□ -1.82
LDLRAD3-202ENST00000524419 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
LDLRAD3-202ENST00000524419 KRTAP5-3Q6L8H2 238 aa3.64□□□□□ -1.83
LDLRAD3-202ENST00000524419 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
LDLRAD3-202ENST00000524419 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
LDLRAD3-202ENST00000524419 PRM1P04553 51 aa3.56□□□□□ -1.84
LDLRAD3-202ENST00000524419 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
LDLRAD3-202ENST00000524419 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
LDLRAD3-202ENST00000524419 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
LDLRAD3-202ENST00000524419 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
LDLRAD3-202ENST00000524419 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.89
LDLRAD3-202ENST00000524419 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
LDLRAD3-202ENST00000524419 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
LDLRAD3-202ENST00000524419 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
LDLRAD3-202ENST00000524419 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
LDLRAD3-202ENST00000524419 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
LDLRAD3-202ENST00000524419 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
LDLRAD3-202ENST00000524419 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
LDLRAD3-202ENST00000524419 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
LDLRAD3-202ENST00000524419 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
LDLRAD3-202ENST00000524419 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
LDLRAD3-202ENST00000524419 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
LDLRAD3-202ENST00000524419 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
LDLRAD3-202ENST00000524419 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
LDLRAD3-202ENST00000524419 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
LDLRAD3-202ENST00000524419 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
LDLRAD3-202ENST00000524419 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
LDLRAD3-202ENST00000524419 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 72.8 ms