RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
CTNNA1-242ENST00000524292 SPINT4Q6UDR6 99 aa3.17□□□□□ -1.9
CTNNA1-242ENST00000524292 A0A1B0GU33 70 aa3.16□□□□□ -1.9
CTNNA1-242ENST00000524292 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
CTNNA1-242ENST00000524292 SPATA8Q6RVD6 105 aa3.16□□□□□ -1.9
CTNNA1-242ENST00000524292 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
CTNNA1-242ENST00000524292 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
CTNNA1-242ENST00000524292 DSTQ03001 7570 aaKnown RBP3.15□□□□□ -1.9
CTNNA1-242ENST00000524292 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
CTNNA1-242ENST00000524292 A8MU10 97 aa3.12□□□□□ -1.91
CTNNA1-242ENST00000524292 COX7CP15954 63 aa3.12□□□□□ -1.91
CTNNA1-242ENST00000524292 KRTAP12-1P59990 96 aa3.11□□□□□ -1.91
CTNNA1-242ENST00000524292 SMIM26A0A096LP01 95 aa3.1□□□□□ -1.91
CTNNA1-242ENST00000524292 CYSTM1Q9H1C7 97 aa3.1□□□□□ -1.91
CTNNA1-242ENST00000524292 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
CTNNA1-242ENST00000524292 H7BZZ5 65 aa3.09□□□□□ -1.91
CTNNA1-242ENST00000524292 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
CTNNA1-242ENST00000524292 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
CTNNA1-242ENST00000524292 A0A1B0GU69 56 aa3.08□□□□□ -1.92
CTNNA1-242ENST00000524292 MT1GP13640 62 aa3.08□□□□□ -1.92
CTNNA1-242ENST00000524292 TNP1P09430 55 aa3.02□□□□□ -1.93
CTNNA1-242ENST00000524292 MT1MQ8N339 61 aa3.02□□□□□ -1.93
CTNNA1-242ENST00000524292 MT1LQ93083 61 aa3.01□□□□□ -1.93
CTNNA1-242ENST00000524292 PRR15LQ9BU68 103 aa3□□□□□ -1.93
CTNNA1-242ENST00000524292 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
CTNNA1-242ENST00000524292 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
CTNNA1-242ENST00000524292 ANAPC13Q9BS18 74 aa2.99□□□□□ -1.93
CTNNA1-242ENST00000524292 MT4P47944 62 aa2.98□□□□□ -1.93
CTNNA1-242ENST00000524292 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
CTNNA1-242ENST00000524292 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
CTNNA1-242ENST00000524292 ATP5EP56381 51 aaPredicted RBP2.95□□□□□ -1.94
CTNNA1-242ENST00000524292 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
CTNNA1-242ENST00000524292 CCDC179H3BU77 68 aa2.9□□□□□ -1.95
CTNNA1-242ENST00000524292 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
CTNNA1-242ENST00000524292 LINC01558Q9Y6Z2 57 aa2.89□□□□□ -1.95
CTNNA1-242ENST00000524292 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
CTNNA1-242ENST00000524292 UQCR11O14957 56 aa2.87□□□□□ -1.95
CTNNA1-242ENST00000524292 TMEM258P61165 79 aa2.82□□□□□ -1.96
CTNNA1-242ENST00000524292 KRTAP25-1Q3LHN0 102 aa2.82□□□□□ -1.96
CTNNA1-242ENST00000524292 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
CTNNA1-242ENST00000524292 K7ERS5 55 aa2.8□□□□□ -1.96
CTNNA1-242ENST00000524292 MIR22HGQ0VDD5 57 aa2.79□□□□□ -1.96
CTNNA1-242ENST00000524292 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
CTNNA1-242ENST00000524292 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
CTNNA1-242ENST00000524292 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
CTNNA1-242ENST00000524292 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
CTNNA1-242ENST00000524292 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
CTNNA1-242ENST00000524292 V9GYY9 64 aa2.71□□□□□ -1.98
CTNNA1-242ENST00000524292 PSPHP1O15172 72 aa2.69□□□□□ -1.98
CTNNA1-242ENST00000524292 Q1T7F1 81 aa2.65□□□□□ -1.99
CTNNA1-242ENST00000524292 CDC42SE1Q9NRR8 79 aa2.62□□□□□ -1.99
CTNNA1-242ENST00000524292 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
CTNNA1-242ENST00000524292 A6NED7 52 aa2.61□□□□□ -1.99
CTNNA1-242ENST00000524292 MT1AP04731 61 aa2.57□□□□□ -2
CTNNA1-242ENST00000524292 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
CTNNA1-242ENST00000524292 LCE1CQ5T751 118 aa2.57□□□□□ -2
CTNNA1-242ENST00000524292 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
CTNNA1-242ENST00000524292 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
CTNNA1-242ENST00000524292 ROMO1P60602 79 aa2.55□□□□□ -2
CTNNA1-242ENST00000524292 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
CTNNA1-242ENST00000524292 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
CTNNA1-242ENST00000524292 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
CTNNA1-242ENST00000524292 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
CTNNA1-242ENST00000524292 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
CTNNA1-242ENST00000524292 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
CTNNA1-242ENST00000524292 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
CTNNA1-242ENST00000524292 BRK1Q8WUW1 75 aa2.19□□□□□ -2.06
CTNNA1-242ENST00000524292 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
CTNNA1-242ENST00000524292 PMAIP1Q13794 54 aa2.11□□□□□ -2.07
CTNNA1-242ENST00000524292 PRO0628Q9UI54 55 aa2.07□□□□□ -2.08
CTNNA1-242ENST00000524292 KTN1-AS1Q86SY8 53 aa1.94□□□□□ -2.1
CTNNA1-242ENST00000524292 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
CTNNA1-242ENST00000524292 LUZP6Q538Z0 58 aa1.79□□□□□ -2.12
CTNNA1-242ENST00000524292 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
CTNNA1-242ENST00000524292 INE1O15225 51 aa1.29□□□□□ -2.2
CTNNA1-242ENST00000524292 PRM1P04553 51 aa1.29□□□□□ -2.2
CTNNA1-242ENST00000524292 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
CTNNA1-242ENST00000524292 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 59.8 ms