RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
SPARC-206ENST00000524277 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
SPARC-206ENST00000524277 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
SPARC-206ENST00000524277 A8MU10 97 aa4.06□□□□□ -1.76
SPARC-206ENST00000524277 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
SPARC-206ENST00000524277 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
SPARC-206ENST00000524277 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
SPARC-206ENST00000524277 PRR15LQ9BU68 103 aa4.01□□□□□ -1.77
SPARC-206ENST00000524277 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
SPARC-206ENST00000524277 V9GYY9 64 aa3.96□□□□□ -1.78
SPARC-206ENST00000524277 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
SPARC-206ENST00000524277 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
SPARC-206ENST00000524277 KRTAP4-7Q9BYR0 210 aa3.92□□□□□ -1.78
SPARC-206ENST00000524277 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
SPARC-206ENST00000524277 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
SPARC-206ENST00000524277 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
SPARC-206ENST00000524277 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
SPARC-206ENST00000524277 ANAPC13Q9BS18 74 aa3.89□□□□□ -1.79
SPARC-206ENST00000524277 LINC01558Q9Y6Z2 57 aa3.89□□□□□ -1.79
SPARC-206ENST00000524277 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
SPARC-206ENST00000524277 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
SPARC-206ENST00000524277 UQCR11O14957 56 aa3.85□□□□□ -1.79
SPARC-206ENST00000524277 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
SPARC-206ENST00000524277 CCDC179H3BU77 68 aa3.78□□□□□ -1.8
SPARC-206ENST00000524277 K7ERS5 55 aa3.75□□□□□ -1.81
SPARC-206ENST00000524277 KRTAP23-1A1A580 65 aa3.73□□□□□ -1.81
SPARC-206ENST00000524277 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
SPARC-206ENST00000524277 MIR22HGQ0VDD5 57 aa3.72□□□□□ -1.81
SPARC-206ENST00000524277 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
SPARC-206ENST00000524277 TMEM258P61165 79 aa3.69□□□□□ -1.82
SPARC-206ENST00000524277 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
SPARC-206ENST00000524277 PRO0628Q9UI54 55 aa3.67□□□□□ -1.82
SPARC-206ENST00000524277 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
SPARC-206ENST00000524277 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
SPARC-206ENST00000524277 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
SPARC-206ENST00000524277 MT1AP04731 61 aa3.58□□□□□ -1.84
SPARC-206ENST00000524277 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
SPARC-206ENST00000524277 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
SPARC-206ENST00000524277 Q1T7F1 81 aa3.51□□□□□ -1.85
SPARC-206ENST00000524277 PSPHP1O15172 72 aa3.5□□□□□ -1.85
SPARC-206ENST00000524277 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
SPARC-206ENST00000524277 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
SPARC-206ENST00000524277 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
SPARC-206ENST00000524277 RPS28P62857 69 aaKnown RBP3.47□□□□□ -1.85
SPARC-206ENST00000524277 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
SPARC-206ENST00000524277 A6NED7 52 aa3.41□□□□□ -1.86
SPARC-206ENST00000524277 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
SPARC-206ENST00000524277 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
SPARC-206ENST00000524277 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.87
SPARC-206ENST00000524277 ROMO1P60602 79 aa3.4□□□□□ -1.87
SPARC-206ENST00000524277 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
SPARC-206ENST00000524277 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
SPARC-206ENST00000524277 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
SPARC-206ENST00000524277 MT3P25713 68 aa3.31□□□□□ -1.88
SPARC-206ENST00000524277 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
SPARC-206ENST00000524277 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
SPARC-206ENST00000524277 BRK1Q8WUW1 75 aa3.25□□□□□ -1.89
SPARC-206ENST00000524277 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
SPARC-206ENST00000524277 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
SPARC-206ENST00000524277 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
SPARC-206ENST00000524277 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
SPARC-206ENST00000524277 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
SPARC-206ENST00000524277 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SPARC-206ENST00000524277 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SPARC-206ENST00000524277 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
SPARC-206ENST00000524277 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SPARC-206ENST00000524277 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
SPARC-206ENST00000524277 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
SPARC-206ENST00000524277 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
SPARC-206ENST00000524277 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
SPARC-206ENST00000524277 INE1O15225 51 aa2.38□□□□□ -2.03
SPARC-206ENST00000524277 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
SPARC-206ENST00000524277 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
SPARC-206ENST00000524277 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
SPARC-206ENST00000524277 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
SPARC-206ENST00000524277 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
SPARC-206ENST00000524277 PRM1P04553 51 aa1.69□□□□□ -2.14
SPARC-206ENST00000524277 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 68.5 ms