RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 A0A1B0GU69 56 aa6.47□□□□□ -1.37
PTP4A3-206ENST00000524028 AHNAK2Q8IVF2 5795 aa6.46□□□□□ -1.38
PTP4A3-206ENST00000524028 TNP1P09430 55 aa6.44□□□□□ -1.38
PTP4A3-206ENST00000524028 KRTAP5-10Q6L8G5 202 aa6.42□□□□□ -1.38
PTP4A3-206ENST00000524028 CCDC179H3BU77 68 aa6.4□□□□□ -1.38
PTP4A3-206ENST00000524028 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
PTP4A3-206ENST00000524028 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
PTP4A3-206ENST00000524028 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
PTP4A3-206ENST00000524028 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
PTP4A3-206ENST00000524028 KRTAP5-7Q6L8G8 165 aa6.19□□□□□ -1.42
PTP4A3-206ENST00000524028 KRTAP5-5Q701N2 237 aaPredicted RBP6.18□□□□□ -1.42
PTP4A3-206ENST00000524028 TMEM258P61165 79 aa6.17□□□□□ -1.42
PTP4A3-206ENST00000524028 PRR15LQ9BU68 103 aa6.15□□□□□ -1.42
PTP4A3-206ENST00000524028 SPRR5A0A1B0GTR4 108 aa6.1□□□□□ -1.43
PTP4A3-206ENST00000524028 LINC01558Q9Y6Z2 57 aa6.09□□□□□ -1.43
PTP4A3-206ENST00000524028 ATP5EP56381 51 aaPredicted RBP6.07□□□□□ -1.44
PTP4A3-206ENST00000524028 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
PTP4A3-206ENST00000524028 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
PTP4A3-206ENST00000524028 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
PTP4A3-206ENST00000524028 UQCR11O14957 56 aa5.97□□□□□ -1.45
PTP4A3-206ENST00000524028 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
PTP4A3-206ENST00000524028 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
PTP4A3-206ENST00000524028 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
PTP4A3-206ENST00000524028 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
PTP4A3-206ENST00000524028 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
PTP4A3-206ENST00000524028 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
PTP4A3-206ENST00000524028 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
PTP4A3-206ENST00000524028 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
PTP4A3-206ENST00000524028 K7ERS5 55 aa5.71□□□□□ -1.5
PTP4A3-206ENST00000524028 Q1T7F1 81 aa5.7□□□□□ -1.5
PTP4A3-206ENST00000524028 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
PTP4A3-206ENST00000524028 KRTAP5-2Q701N4 177 aa5.69□□□□□ -1.5
PTP4A3-206ENST00000524028 V9GYY9 64 aa5.68□□□□□ -1.5
PTP4A3-206ENST00000524028 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
PTP4A3-206ENST00000524028 MT1AP04731 61 aa5.66□□□□□ -1.5
PTP4A3-206ENST00000524028 PSPHP1O15172 72 aa5.58□□□□□ -1.52
PTP4A3-206ENST00000524028 KRTAP5-8O75690 187 aa5.53□□□□□ -1.52
PTP4A3-206ENST00000524028 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
PTP4A3-206ENST00000524028 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
PTP4A3-206ENST00000524028 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
PTP4A3-206ENST00000524028 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
PTP4A3-206ENST00000524028 A6NED7 52 aa5.42□□□□□ -1.54
PTP4A3-206ENST00000524028 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.54
PTP4A3-206ENST00000524028 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
PTP4A3-206ENST00000524028 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
PTP4A3-206ENST00000524028 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
PTP4A3-206ENST00000524028 AHNAKQ09666 5890 aaKnown RBP5.36□□□□□ -1.55
PTP4A3-206ENST00000524028 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
PTP4A3-206ENST00000524028 ROMO1P60602 79 aa5.32□□□□□ -1.56
PTP4A3-206ENST00000524028 KRTAP9-9Q9BYP9 154 aa5.25□□□□□ -1.57
PTP4A3-206ENST00000524028 MT3P25713 68 aa5.17□□□□□ -1.58
PTP4A3-206ENST00000524028 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
PTP4A3-206ENST00000524028 KRTAP5-1Q6L8H4 278 aa5.15□□□□□ -1.59
PTP4A3-206ENST00000524028 KTN1-AS1Q86SY8 53 aa4.97□□□□□ -1.61
PTP4A3-206ENST00000524028 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
PTP4A3-206ENST00000524028 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
PTP4A3-206ENST00000524028 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
PTP4A3-206ENST00000524028 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
PTP4A3-206ENST00000524028 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
PTP4A3-206ENST00000524028 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
PTP4A3-206ENST00000524028 H3BS24 57 aa4.1□□□□□ -1.75
PTP4A3-206ENST00000524028 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
PTP4A3-206ENST00000524028 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
PTP4A3-206ENST00000524028 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
PTP4A3-206ENST00000524028 LCE1FQ5T754 118 aa4□□□□□ -1.77
PTP4A3-206ENST00000524028 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
PTP4A3-206ENST00000524028 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
PTP4A3-206ENST00000524028 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
PTP4A3-206ENST00000524028 KRTAP21-2Q3LI59 83 aa3.75□□□□□ -1.81
PTP4A3-206ENST00000524028 PHGR1C9JFL3 82 aa3.73□□□□□ -1.81
PTP4A3-206ENST00000524028 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
PTP4A3-206ENST00000524028 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
PTP4A3-206ENST00000524028 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
PTP4A3-206ENST00000524028 INE1O15225 51 aa3.23□□□□□ -1.89
PTP4A3-206ENST00000524028 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
PTP4A3-206ENST00000524028 PRM1P04553 51 aa2.72□□□□□ -1.97
PTP4A3-206ENST00000524028 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 66.6 ms