RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 A0A1B0GV90 55 aa1.73□□□□□ -2.13
HDAC2-216ENST00000523628 SPINT4Q6UDR6 99 aa1.73□□□□□ -2.13
HDAC2-216ENST00000523628 KRTAP8-1Q8IUC2 63 aa1.73□□□□□ -2.13
HDAC2-216ENST00000523628 NEBP20929 6669 aa1.72□□□□□ -2.13
HDAC2-216ENST00000523628 P0C880 135 aa1.71□□□□□ -2.14
HDAC2-216ENST00000523628 SPRR2FQ96RM1 72 aa1.71□□□□□ -2.14
HDAC2-216ENST00000523628 V9GYY9 64 aa1.71□□□□□ -2.14
HDAC2-216ENST00000523628 MDN1Q9NU22 5596 aa1.71□□□□□ -2.14
HDAC2-216ENST00000523628 KMT2DO14686 5537 aa1.7□□□□□ -2.14
HDAC2-216ENST00000523628 SPRR2EP22531 72 aa1.69□□□□□ -2.14
HDAC2-216ENST00000523628 SPRR2BP35325 72 aa1.69□□□□□ -2.14
HDAC2-216ENST00000523628 SPRR2AP35326 72 aa1.69□□□□□ -2.14
HDAC2-216ENST00000523628 MT1XP80297 61 aa1.69□□□□□ -2.14
HDAC2-216ENST00000523628 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
HDAC2-216ENST00000523628 SERP1Q9Y6X1 66 aa1.69□□□□□ -2.14
HDAC2-216ENST00000523628 LINC01554Q52M75 96 aa1.68□□□□□ -2.14
HDAC2-216ENST00000523628 PRO0628Q9UI54 55 aa1.68□□□□□ -2.14
HDAC2-216ENST00000523628 MUC12Q9UKN1 5478 aa1.67□□□□□ -2.14
HDAC2-216ENST00000523628 KRTAP25-1Q3LHN0 102 aa1.66□□□□□ -2.14
HDAC2-216ENST00000523628 SERP2Q8N6R1 65 aa1.66□□□□□ -2.14
HDAC2-216ENST00000523628 SPRR2DP22532 72 aa1.65□□□□□ -2.15
HDAC2-216ENST00000523628 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
HDAC2-216ENST00000523628 ATP5EP56381 51 aaPredicted RBP1.62□□□□□ -2.15
HDAC2-216ENST00000523628 PRR15LQ9BU68 103 aa1.62□□□□□ -2.15
HDAC2-216ENST00000523628 CYSTM1Q9H1C7 97 aa1.61□□□□□ -2.15
HDAC2-216ENST00000523628 A0A1B0GU33 70 aa1.6□□□□□ -2.15
HDAC2-216ENST00000523628 A0A1B0GU69 56 aa1.59□□□□□ -2.15
HDAC2-216ENST00000523628 COX7CP15954 63 aa1.59□□□□□ -2.15
HDAC2-216ENST00000523628 COA5Q86WW8 74 aa1.59□□□□□ -2.15
HDAC2-216ENST00000523628 SNURFQ9Y675 71 aa1.59□□□□□ -2.15
HDAC2-216ENST00000523628 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
HDAC2-216ENST00000523628 C10orf95Q9H7T3 257 aa1.58□□□□□ -2.16
HDAC2-216ENST00000523628 TNP1P09430 55 aa1.56□□□□□ -2.16
HDAC2-216ENST00000523628 MT1GP13640 62 aa1.56□□□□□ -2.16
HDAC2-216ENST00000523628 KRTAP19-3Q7Z4W3 81 aa1.56□□□□□ -2.16
HDAC2-216ENST00000523628 K7ERS5 55 aa1.55□□□□□ -2.16
HDAC2-216ENST00000523628 A0A0D9SG42 100 aa1.53□□□□□ -2.16
HDAC2-216ENST00000523628 H7BZZ5 65 aa1.53□□□□□ -2.16
HDAC2-216ENST00000523628 A6NED7 52 aa1.52□□□□□ -2.17
HDAC2-216ENST00000523628 UQCR11O14957 56 aa1.52□□□□□ -2.17
HDAC2-216ENST00000523628 MT1EP04732 61 aa1.52□□□□□ -2.17
HDAC2-216ENST00000523628 ANAPC13Q9BS18 74 aa1.52□□□□□ -2.17
HDAC2-216ENST00000523628 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
HDAC2-216ENST00000523628 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
HDAC2-216ENST00000523628 KRTAP13-4Q3LI77 160 aa1.5□□□□□ -2.17
HDAC2-216ENST00000523628 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
HDAC2-216ENST00000523628 DSTQ03001 7570 aaKnown RBP1.49□□□□□ -2.17
HDAC2-216ENST00000523628 TMEM258P61165 79 aa1.49□□□□□ -2.17
HDAC2-216ENST00000523628 SPATA8Q6RVD6 105 aa1.49□□□□□ -2.17
HDAC2-216ENST00000523628 LINC01558Q9Y6Z2 57 aa1.48□□□□□ -2.17
HDAC2-216ENST00000523628 RPS28P62857 69 aaKnown RBP1.47□□□□□ -2.17
HDAC2-216ENST00000523628 CCDC179H3BU77 68 aa1.46□□□□□ -2.18
HDAC2-216ENST00000523628 KRTAP19-5Q3LI72 72 aa1.45□□□□□ -2.18
HDAC2-216ENST00000523628 MT1MQ8N339 61 aa1.45□□□□□ -2.18
HDAC2-216ENST00000523628 MT1LQ93083 61 aa1.44□□□□□ -2.18
HDAC2-216ENST00000523628 MIR22HGQ0VDD5 57 aa1.43□□□□□ -2.18
HDAC2-216ENST00000523628 MT4P47944 62 aa1.38□□□□□ -2.19
HDAC2-216ENST00000523628 Q1T7F1 81 aa1.38□□□□□ -2.19
HDAC2-216ENST00000523628 CDC42SE1Q9NRR8 79 aa1.38□□□□□ -2.19
HDAC2-216ENST00000523628 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
HDAC2-216ENST00000523628 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
HDAC2-216ENST00000523628 KRTAP20-2Q3LI61 65 aa1.33□□□□□ -2.2
HDAC2-216ENST00000523628 ROMO1P60602 79 aa1.31□□□□□ -2.2
HDAC2-216ENST00000523628 PMAIP1Q13794 54 aa1.29□□□□□ -2.2
HDAC2-216ENST00000523628 MT1AP04731 61 aa1.27□□□□□ -2.21
HDAC2-216ENST00000523628 BRK1Q8WUW1 75 aa1.27□□□□□ -2.21
HDAC2-216ENST00000523628 KTN1-AS1Q86SY8 53 aa1.25□□□□□ -2.21
HDAC2-216ENST00000523628 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
HDAC2-216ENST00000523628 SYNE1Q8NF91 8797 aaKnown RBP1.2□□□□□ -2.22
HDAC2-216ENST00000523628 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
HDAC2-216ENST00000523628 KRTAP6-1Q3LI64 71 aa1.18□□□□□ -2.22
HDAC2-216ENST00000523628 KRTAP6-2Q3LI66 62 aa1.15□□□□□ -2.23
HDAC2-216ENST00000523628 MUC5ACP98088 5654 aa1.15□□□□□ -2.23
HDAC2-216ENST00000523628 INE1O15225 51 aa0.84□□□□□ -2.27
HDAC2-216ENST00000523628 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
HDAC2-216ENST00000523628 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
HDAC2-216ENST00000523628 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
HDAC2-216ENST00000523628 PRM1P04553 51 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 49.3 ms