RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 COA5Q86WW8 74 aa1.59□□□□□ -2.15
NPM1-210ENST00000523339 S4R3F8 94 aa1.59□□□□□ -2.15
NPM1-210ENST00000523339 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
NPM1-210ENST00000523339 CRIPTQ9P021 101 aa1.58□□□□□ -2.16
NPM1-210ENST00000523339 A8MUN3 132 aa1.57□□□□□ -2.16
NPM1-210ENST00000523339 NDUFC1O43677 76 aa1.57□□□□□ -2.16
NPM1-210ENST00000523339 P0C880 135 aa1.57□□□□□ -2.16
NPM1-210ENST00000523339 TMEM258P61165 79 aa1.57□□□□□ -2.16
NPM1-210ENST00000523339 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
NPM1-210ENST00000523339 KRTAP13-4Q3LI77 160 aa1.56□□□□□ -2.16
NPM1-210ENST00000523339 ACYP2P14621 99 aa1.55□□□□□ -2.16
NPM1-210ENST00000523339 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
NPM1-210ENST00000523339 H0YAA0 97 aa1.53□□□□□ -2.16
NPM1-210ENST00000523339 ATP5EP56381 51 aaPredicted RBP1.53□□□□□ -2.16
NPM1-210ENST00000523339 MT1XP80297 61 aa1.53□□□□□ -2.16
NPM1-210ENST00000523339 ADM2Q7Z4H4 148 aa1.53□□□□□ -2.16
NPM1-210ENST00000523339 SERP1Q9Y6X1 66 aa1.53□□□□□ -2.16
NPM1-210ENST00000523339 A8MU10 97 aa1.51□□□□□ -2.17
NPM1-210ENST00000523339 LINC01558Q9Y6Z2 57 aa1.51□□□□□ -2.17
NPM1-210ENST00000523339 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
NPM1-210ENST00000523339 RPS28P62857 69 aaKnown RBP1.49□□□□□ -2.17
NPM1-210ENST00000523339 CHKB-CPT1BH3BT56 60 aa1.48□□□□□ -2.17
NPM1-210ENST00000523339 Q1T7F1 81 aa1.48□□□□□ -2.17
NPM1-210ENST00000523339 LINC01554Q52M75 96 aa1.48□□□□□ -2.17
NPM1-210ENST00000523339 SPATA8Q6RVD6 105 aa1.48□□□□□ -2.17
NPM1-210ENST00000523339 R4GN34 69 aa1.48□□□□□ -2.17
NPM1-210ENST00000523339 SMIM26A0A096LP01 95 aa1.46□□□□□ -2.18
NPM1-210ENST00000523339 PSPHP1O15172 72 aa1.46□□□□□ -2.18
NPM1-210ENST00000523339 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
NPM1-210ENST00000523339 M0QZ58 72 aa1.45□□□□□ -2.18
NPM1-210ENST00000523339 KRTAP12-1P59990 96 aa1.45□□□□□ -2.18
NPM1-210ENST00000523339 PRR15LQ9BU68 103 aa1.45□□□□□ -2.18
NPM1-210ENST00000523339 A0A1B0GU69 56 aa1.44□□□□□ -2.18
NPM1-210ENST00000523339 PP632Q6XCG6 107 aa1.44□□□□□ -2.18
NPM1-210ENST00000523339 KRTAP19-3Q7Z4W3 81 aa1.44□□□□□ -2.18
NPM1-210ENST00000523339 SPTSSBQ8NFR3 76 aa1.44□□□□□ -2.18
NPM1-210ENST00000523339 LCE3DQ9BYE3 92 aa1.44□□□□□ -2.18
NPM1-210ENST00000523339 A0A1B0GU33 70 aa1.43□□□□□ -2.18
NPM1-210ENST00000523339 A0A0D9SG42 100 aa1.42□□□□□ -2.18
NPM1-210ENST00000523339 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
NPM1-210ENST00000523339 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
NPM1-210ENST00000523339 C10orf95Q9H7T3 257 aa1.4□□□□□ -2.19
NPM1-210ENST00000523339 MT1EP04732 61 aa1.38□□□□□ -2.19
NPM1-210ENST00000523339 MT1GP13640 62 aa1.38□□□□□ -2.19
NPM1-210ENST00000523339 MIR22HGQ0VDD5 57 aa1.38□□□□□ -2.19
NPM1-210ENST00000523339 V9GYY9 64 aa1.38□□□□□ -2.19
NPM1-210ENST00000523339 UQCR11O14957 56 aa1.37□□□□□ -2.19
NPM1-210ENST00000523339 SEC61GP60059 68 aa1.37□□□□□ -2.19
NPM1-210ENST00000523339 A6NED7 52 aa1.36□□□□□ -2.19
NPM1-210ENST00000523339 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
NPM1-210ENST00000523339 SPINT4Q6UDR6 99 aa1.36□□□□□ -2.19
NPM1-210ENST00000523339 CAMK2N1Q7Z7J9 78 aa1.36□□□□□ -2.19
NPM1-210ENST00000523339 CDC42SE1Q9NRR8 79 aa1.36□□□□□ -2.19
NPM1-210ENST00000523339 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
NPM1-210ENST00000523339 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
NPM1-210ENST00000523339 MT1MQ8N339 61 aa1.34□□□□□ -2.19
NPM1-210ENST00000523339 KRTAP19-5Q3LI72 72 aa1.31□□□□□ -2.2
NPM1-210ENST00000523339 BRK1Q8WUW1 75 aa1.31□□□□□ -2.2
NPM1-210ENST00000523339 MT1LQ93083 61 aa1.28□□□□□ -2.2
NPM1-210ENST00000523339 ROMO1P60602 79 aa1.27□□□□□ -2.21
NPM1-210ENST00000523339 PRO0628Q9UI54 55 aa1.26□□□□□ -2.21
NPM1-210ENST00000523339 TNP1P09430 55 aa1.24□□□□□ -2.21
NPM1-210ENST00000523339 KRTAP25-1Q3LHN0 102 aa1.24□□□□□ -2.21
NPM1-210ENST00000523339 SYNE1Q8NF91 8797 aaKnown RBP1.24□□□□□ -2.21
NPM1-210ENST00000523339 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
NPM1-210ENST00000523339 K7ERS5 55 aa1.21□□□□□ -2.22
NPM1-210ENST00000523339 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
NPM1-210ENST00000523339 PMAIP1Q13794 54 aa1.21□□□□□ -2.22
NPM1-210ENST00000523339 KTN1-AS1Q86SY8 53 aa1.17□□□□□ -2.22
NPM1-210ENST00000523339 KRTAP6-2Q3LI66 62 aa1.12□□□□□ -2.23
NPM1-210ENST00000523339 KRTAP6-1Q3LI64 71 aa1.09□□□□□ -2.23
NPM1-210ENST00000523339 LUZP6Q538Z0 58 aa1.09□□□□□ -2.23
NPM1-210ENST00000523339 MT1AP04731 61 aa1.08□□□□□ -2.24
NPM1-210ENST00000523339 PHGR1C9JFL3 82 aa1□□□□□ -2.25
NPM1-210ENST00000523339 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
NPM1-210ENST00000523339 PRM1P04553 51 aa0.69□□□□□ -2.3
NPM1-210ENST00000523339 INE1O15225 51 aa0.68□□□□□ -2.3
NPM1-210ENST00000523339 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 6.6 ms