RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 KRTAP5-5Q701N2 237 aaPredicted RBP7.55□□□□□ -1.2
PVT1-218ENST00000523328 TNP1P09430 55 aa7.5□□□□□ -1.21
PVT1-218ENST00000523328 KRTAP12-4P60329 112 aa7.44□□□□□ -1.22
PVT1-218ENST00000523328 KRTAP12-3P60328 96 aa7.39□□□□□ -1.23
PVT1-218ENST00000523328 SYNE1Q8NF91 8797 aaKnown RBP7.36□□□□□ -1.23
PVT1-218ENST00000523328 SMIM26A0A096LP01 95 aa7.36□□□□□ -1.23
PVT1-218ENST00000523328 A8MU10 97 aa7.35□□□□□ -1.23
PVT1-218ENST00000523328 SERP2Q8N6R1 65 aa7.32□□□□□ -1.24
PVT1-218ENST00000523328 LOC100996750A0A140TA64 210 aa7.26□□□□□ -1.25
PVT1-218ENST00000523328 A0A1B0GU69 56 aa7.17□□□□□ -1.26
PVT1-218ENST00000523328 KRTAP4-11Q9BYQ6 195 aa7.17□□□□□ -1.26
PVT1-218ENST00000523328 K7ERU9 68 aa7.16□□□□□ -1.26
PVT1-218ENST00000523328 KRTAP5-2Q701N4 177 aa7.02□□□□□ -1.29
PVT1-218ENST00000523328 H7BZZ5 65 aa6.99□□□□□ -1.29
PVT1-218ENST00000523328 KRTAP5-8O75690 187 aa6.95□□□□□ -1.3
PVT1-218ENST00000523328 MUC5ACP98088 5654 aa6.93□□□□□ -1.3
PVT1-218ENST00000523328 COX7CP15954 63 aa6.91□□□□□ -1.3
PVT1-218ENST00000523328 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
PVT1-218ENST00000523328 AHNAKQ09666 5890 aaKnown RBP6.91□□□□□ -1.3
PVT1-218ENST00000523328 MUC5BQ9HC84 5762 aaPredicted RBP6.9□□□□□ -1.31
PVT1-218ENST00000523328 KRTAP6-1Q3LI64 71 aa6.84□□□□□ -1.31
PVT1-218ENST00000523328 MT1AP04731 61 aa6.82□□□□□ -1.32
PVT1-218ENST00000523328 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
PVT1-218ENST00000523328 LCE3CQ5T5A8 94 aa6.74□□□□□ -1.33
PVT1-218ENST00000523328 PRR15LQ9BU68 103 aa6.74□□□□□ -1.33
PVT1-218ENST00000523328 OBSCNQ5VST9 7968 aa6.71□□□□□ -1.33
PVT1-218ENST00000523328 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
PVT1-218ENST00000523328 KRTAP9-9Q9BYP9 154 aa6.66□□□□□ -1.34
PVT1-218ENST00000523328 KRTAP9-4Q9BYQ2 154 aa6.65□□□□□ -1.34
PVT1-218ENST00000523328 KRTAP6-2Q3LI66 62 aa6.63□□□□□ -1.35
PVT1-218ENST00000523328 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
PVT1-218ENST00000523328 UQCR11O14957 56 aa6.53□□□□□ -1.36
PVT1-218ENST00000523328 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
PVT1-218ENST00000523328 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
PVT1-218ENST00000523328 KRTAP5-1Q6L8H4 278 aa6.4□□□□□ -1.38
PVT1-218ENST00000523328 ATP5EP56381 51 aaPredicted RBP6.33□□□□□ -1.4
PVT1-218ENST00000523328 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
PVT1-218ENST00000523328 ANAPC13Q9BS18 74 aa6.29□□□□□ -1.4
PVT1-218ENST00000523328 K7ERS5 55 aa6.28□□□□□ -1.4
PVT1-218ENST00000523328 CCDC179H3BU77 68 aa6.25□□□□□ -1.41
PVT1-218ENST00000523328 MT3P25713 68 aa6.25□□□□□ -1.41
PVT1-218ENST00000523328 PCP4P48539 62 aa5.98□□□□□ -1.45
PVT1-218ENST00000523328 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
PVT1-218ENST00000523328 TMEM258P61165 79 aa5.93□□□□□ -1.46
PVT1-218ENST00000523328 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
PVT1-218ENST00000523328 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.46
PVT1-218ENST00000523328 Q1T7F1 81 aa5.89□□□□□ -1.47
PVT1-218ENST00000523328 LCE1EQ5T753 118 aa5.89□□□□□ -1.47
PVT1-218ENST00000523328 PSPHP1O15172 72 aa5.87□□□□□ -1.47
PVT1-218ENST00000523328 ROMO1P60602 79 aa5.77□□□□□ -1.49
PVT1-218ENST00000523328 V9GYY9 64 aa5.73□□□□□ -1.49
PVT1-218ENST00000523328 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
PVT1-218ENST00000523328 A6NED7 52 aa5.61□□□□□ -1.51
PVT1-218ENST00000523328 LCE1BQ5T7P3 118 aa5.58□□□□□ -1.52
PVT1-218ENST00000523328 LCE1CQ5T751 118 aa5.48□□□□□ -1.53
PVT1-218ENST00000523328 KRTAP4-12Q9BQ66 201 aa5.32□□□□□ -1.56
PVT1-218ENST00000523328 KRTAP5-11Q6L8G4 156 aa5.07□□□□□ -1.6
PVT1-218ENST00000523328 LCE1FQ5T754 118 aa5□□□□□ -1.61
PVT1-218ENST00000523328 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.92□□□□□ -1.62
PVT1-218ENST00000523328 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
PVT1-218ENST00000523328 PHGR1C9JFL3 82 aa4.8□□□□□ -1.64
PVT1-218ENST00000523328 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
PVT1-218ENST00000523328 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
PVT1-218ENST00000523328 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
PVT1-218ENST00000523328 KRTAP21-2Q3LI59 83 aa4.52□□□□□ -1.69
PVT1-218ENST00000523328 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
PVT1-218ENST00000523328 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
PVT1-218ENST00000523328 KRTAP4-4Q9BYR3 166 aa4.21□□□□□ -1.74
PVT1-218ENST00000523328 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
PVT1-218ENST00000523328 H3BS24 57 aa4.13□□□□□ -1.75
PVT1-218ENST00000523328 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
PVT1-218ENST00000523328 KRTAP21-1Q3LI58 79 aa3.65□□□□□ -1.83
PVT1-218ENST00000523328 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
PVT1-218ENST00000523328 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
PVT1-218ENST00000523328 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
PVT1-218ENST00000523328 INE1O15225 51 aa3.05□□□□□ -1.92
PVT1-218ENST00000523328 MUC16Q8WXI7 14507 aa2.94□□□□□ -1.94
PVT1-218ENST00000523328 PRM1P04553 51 aa2.93□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 91.5 ms