RNA–Protein interactions for RNA: ENST00000523208.5

CD74-209, Transcript of CD74 molecule, humanhuman

TSL 5

Gene CD74, Length 767 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-209ENST00000523208 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
CD74-209ENST00000523208 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
CD74-209ENST00000523208 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
CD74-209ENST00000523208 PP632Q6XCG6 107 aa4.15□□□□□ -1.75
CD74-209ENST00000523208 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
CD74-209ENST00000523208 MT1LQ93083 61 aa4.14□□□□□ -1.75
CD74-209ENST00000523208 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
CD74-209ENST00000523208 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
CD74-209ENST00000523208 MT1GP13640 62 aa4.07□□□□□ -1.76
CD74-209ENST00000523208 MT1MQ8N339 61 aa4.07□□□□□ -1.76
CD74-209ENST00000523208 LCE3BQ5TA77 95 aa4.05□□□□□ -1.76
CD74-209ENST00000523208 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
CD74-209ENST00000523208 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
CD74-209ENST00000523208 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
CD74-209ENST00000523208 KRTAP15-1Q3LI76 137 aa4□□□□□ -1.77
CD74-209ENST00000523208 SVIPQ8NHG7 77 aa4□□□□□ -1.77
CD74-209ENST00000523208 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
CD74-209ENST00000523208 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
CD74-209ENST00000523208 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
CD74-209ENST00000523208 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
CD74-209ENST00000523208 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
CD74-209ENST00000523208 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
CD74-209ENST00000523208 DSTQ03001 7570 aaKnown RBP3.76□□□□□ -1.81
CD74-209ENST00000523208 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
CD74-209ENST00000523208 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
CD74-209ENST00000523208 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
CD74-209ENST00000523208 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
CD74-209ENST00000523208 MT4P47944 62 aa3.66□□□□□ -1.82
CD74-209ENST00000523208 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
CD74-209ENST00000523208 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
CD74-209ENST00000523208 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
CD74-209ENST00000523208 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
CD74-209ENST00000523208 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
CD74-209ENST00000523208 MT1AP04731 61 aa3.54□□□□□ -1.84
CD74-209ENST00000523208 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
CD74-209ENST00000523208 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
CD74-209ENST00000523208 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
CD74-209ENST00000523208 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
CD74-209ENST00000523208 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
CD74-209ENST00000523208 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
CD74-209ENST00000523208 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
CD74-209ENST00000523208 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
CD74-209ENST00000523208 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
CD74-209ENST00000523208 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
CD74-209ENST00000523208 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
CD74-209ENST00000523208 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
CD74-209ENST00000523208 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
CD74-209ENST00000523208 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
CD74-209ENST00000523208 MT3P25713 68 aa3.18□□□□□ -1.9
CD74-209ENST00000523208 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
CD74-209ENST00000523208 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
CD74-209ENST00000523208 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
CD74-209ENST00000523208 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
CD74-209ENST00000523208 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
CD74-209ENST00000523208 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
CD74-209ENST00000523208 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
CD74-209ENST00000523208 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
CD74-209ENST00000523208 H3BS24 57 aa2.76□□□□□ -1.97
CD74-209ENST00000523208 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
CD74-209ENST00000523208 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
CD74-209ENST00000523208 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
CD74-209ENST00000523208 INE1O15225 51 aa2.71□□□□□ -1.98
CD74-209ENST00000523208 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
CD74-209ENST00000523208 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
CD74-209ENST00000523208 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
CD74-209ENST00000523208 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
CD74-209ENST00000523208 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
CD74-209ENST00000523208 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
CD74-209ENST00000523208 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
CD74-209ENST00000523208 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
CD74-209ENST00000523208 PRM1P04553 51 aa2.27□□□□□ -2.05
CD74-209ENST00000523208 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CD74-209ENST00000523208 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
CD74-209ENST00000523208 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
CD74-209ENST00000523208 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
CD74-209ENST00000523208 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
CD74-209ENST00000523208 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
CD74-209ENST00000523208 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms