RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 LINC01558Q9Y6Z2 57 aa4.07□□□□□ -1.76
DENND3-220ENST00000523066 SMIM26A0A096LP01 95 aa4.05□□□□□ -1.76
DENND3-220ENST00000523066 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
DENND3-220ENST00000523066 PRR15LQ9BU68 103 aa4.03□□□□□ -1.76
DENND3-220ENST00000523066 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
DENND3-220ENST00000523066 KRTAP19-7Q3SYF9 63 aa3.96□□□□□ -1.78
DENND3-220ENST00000523066 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
DENND3-220ENST00000523066 SPRR2DP22532 72 aa3.95□□□□□ -1.78
DENND3-220ENST00000523066 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
DENND3-220ENST00000523066 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
DENND3-220ENST00000523066 UQCR11O14957 56 aa3.92□□□□□ -1.78
DENND3-220ENST00000523066 MT1EP04732 61 aa3.9□□□□□ -1.79
DENND3-220ENST00000523066 PSPHP1O15172 72 aa3.89□□□□□ -1.79
DENND3-220ENST00000523066 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
DENND3-220ENST00000523066 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
DENND3-220ENST00000523066 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
DENND3-220ENST00000523066 TNP1P09430 55 aa3.85□□□□□ -1.79
DENND3-220ENST00000523066 Q1T7F1 81 aa3.85□□□□□ -1.79
DENND3-220ENST00000523066 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
DENND3-220ENST00000523066 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
DENND3-220ENST00000523066 V9GYY9 64 aa3.83□□□□□ -1.8
DENND3-220ENST00000523066 MT1LQ93083 61 aa3.75□□□□□ -1.81
DENND3-220ENST00000523066 A6NED7 52 aa3.73□□□□□ -1.81
DENND3-220ENST00000523066 MT1GP13640 62 aa3.73□□□□□ -1.81
DENND3-220ENST00000523066 RPS28P62857 69 aaKnown RBP3.72□□□□□ -1.81
DENND3-220ENST00000523066 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
DENND3-220ENST00000523066 K7ERS5 55 aa3.71□□□□□ -1.82
DENND3-220ENST00000523066 MT1MQ8N339 61 aa3.71□□□□□ -1.82
DENND3-220ENST00000523066 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
DENND3-220ENST00000523066 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
DENND3-220ENST00000523066 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
DENND3-220ENST00000523066 KRTAP25-1Q3LHN0 102 aa3.67□□□□□ -1.82
DENND3-220ENST00000523066 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
DENND3-220ENST00000523066 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
DENND3-220ENST00000523066 CDC42SE1Q9NRR8 79 aa3.57□□□□□ -1.84
DENND3-220ENST00000523066 ROMO1P60602 79 aa3.53□□□□□ -1.84
DENND3-220ENST00000523066 MT4P47944 62 aa3.48□□□□□ -1.85
DENND3-220ENST00000523066 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
DENND3-220ENST00000523066 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
DENND3-220ENST00000523066 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
DENND3-220ENST00000523066 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
DENND3-220ENST00000523066 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
DENND3-220ENST00000523066 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
DENND3-220ENST00000523066 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
DENND3-220ENST00000523066 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
DENND3-220ENST00000523066 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
DENND3-220ENST00000523066 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
DENND3-220ENST00000523066 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
DENND3-220ENST00000523066 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
DENND3-220ENST00000523066 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
DENND3-220ENST00000523066 MT1AP04731 61 aa3.18□□□□□ -1.9
DENND3-220ENST00000523066 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
DENND3-220ENST00000523066 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
DENND3-220ENST00000523066 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
DENND3-220ENST00000523066 PMAIP1Q13794 54 aa3.11□□□□□ -1.91
DENND3-220ENST00000523066 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
DENND3-220ENST00000523066 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
DENND3-220ENST00000523066 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
DENND3-220ENST00000523066 PRO0628Q9UI54 55 aa2.93□□□□□ -1.94
DENND3-220ENST00000523066 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
DENND3-220ENST00000523066 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
DENND3-220ENST00000523066 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
DENND3-220ENST00000523066 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
DENND3-220ENST00000523066 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
DENND3-220ENST00000523066 KTN1-AS1Q86SY8 53 aa2.8□□□□□ -1.96
DENND3-220ENST00000523066 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
DENND3-220ENST00000523066 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
DENND3-220ENST00000523066 MUC5ACP98088 5654 aa2.56□□□□□ -2
DENND3-220ENST00000523066 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
DENND3-220ENST00000523066 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
DENND3-220ENST00000523066 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
DENND3-220ENST00000523066 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
DENND3-220ENST00000523066 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
DENND3-220ENST00000523066 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
DENND3-220ENST00000523066 PRM1P04553 51 aa1.84□□□□□ -2.11
DENND3-220ENST00000523066 INE1O15225 51 aa1.67□□□□□ -2.14
DENND3-220ENST00000523066 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
DENND3-220ENST00000523066 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 88 ms