RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
PABPC1-219ENST00000522387 KRTAP4-12Q9BQ66 201 aa4.69□□□□□ -1.66
PABPC1-219ENST00000522387 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
PABPC1-219ENST00000522387 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
PABPC1-219ENST00000522387 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
PABPC1-219ENST00000522387 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
PABPC1-219ENST00000522387 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
PABPC1-219ENST00000522387 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
PABPC1-219ENST00000522387 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
PABPC1-219ENST00000522387 KRTAP12-3P60328 96 aa4.53□□□□□ -1.68
PABPC1-219ENST00000522387 MT1EP04732 61 aa4.52□□□□□ -1.69
PABPC1-219ENST00000522387 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
PABPC1-219ENST00000522387 SPRR2EP22531 72 aa4.49□□□□□ -1.69
PABPC1-219ENST00000522387 SPRR2BP35325 72 aa4.49□□□□□ -1.69
PABPC1-219ENST00000522387 SPRR2AP35326 72 aa4.49□□□□□ -1.69
PABPC1-219ENST00000522387 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
PABPC1-219ENST00000522387 NEBP20929 6669 aa4.44□□□□□ -1.7
PABPC1-219ENST00000522387 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
PABPC1-219ENST00000522387 MT1LQ93083 61 aa4.39□□□□□ -1.71
PABPC1-219ENST00000522387 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
PABPC1-219ENST00000522387 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
PABPC1-219ENST00000522387 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.72
PABPC1-219ENST00000522387 SPRR2DP22532 72 aa4.32□□□□□ -1.72
PABPC1-219ENST00000522387 MT1GP13640 62 aa4.31□□□□□ -1.72
PABPC1-219ENST00000522387 INE1O15225 51 aa4.3□□□□□ -1.72
PABPC1-219ENST00000522387 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
PABPC1-219ENST00000522387 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
PABPC1-219ENST00000522387 MT1MQ8N339 61 aa4.28□□□□□ -1.72
PABPC1-219ENST00000522387 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
PABPC1-219ENST00000522387 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
PABPC1-219ENST00000522387 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
PABPC1-219ENST00000522387 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
PABPC1-219ENST00000522387 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
PABPC1-219ENST00000522387 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
PABPC1-219ENST00000522387 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
PABPC1-219ENST00000522387 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
PABPC1-219ENST00000522387 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
PABPC1-219ENST00000522387 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
PABPC1-219ENST00000522387 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
PABPC1-219ENST00000522387 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
PABPC1-219ENST00000522387 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
PABPC1-219ENST00000522387 HMCN1Q96RW7 5635 aa3.84□□□□□ -1.79
PABPC1-219ENST00000522387 MT4P47944 62 aa3.83□□□□□ -1.8
PABPC1-219ENST00000522387 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
PABPC1-219ENST00000522387 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
PABPC1-219ENST00000522387 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
PABPC1-219ENST00000522387 MT1AP04731 61 aa3.7□□□□□ -1.82
PABPC1-219ENST00000522387 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
PABPC1-219ENST00000522387 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
PABPC1-219ENST00000522387 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.84
PABPC1-219ENST00000522387 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
PABPC1-219ENST00000522387 MT3P25713 68 aa3.37□□□□□ -1.87
PABPC1-219ENST00000522387 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
PABPC1-219ENST00000522387 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
PABPC1-219ENST00000522387 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
PABPC1-219ENST00000522387 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
PABPC1-219ENST00000522387 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
PABPC1-219ENST00000522387 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
PABPC1-219ENST00000522387 PRM1P04553 51 aa3.14□□□□□ -1.91
PABPC1-219ENST00000522387 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
PABPC1-219ENST00000522387 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
PABPC1-219ENST00000522387 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
PABPC1-219ENST00000522387 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
PABPC1-219ENST00000522387 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
PABPC1-219ENST00000522387 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
PABPC1-219ENST00000522387 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
PABPC1-219ENST00000522387 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
PABPC1-219ENST00000522387 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
PABPC1-219ENST00000522387 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
PABPC1-219ENST00000522387 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
PABPC1-219ENST00000522387 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
PABPC1-219ENST00000522387 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
PABPC1-219ENST00000522387 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
PABPC1-219ENST00000522387 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
PABPC1-219ENST00000522387 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
PABPC1-219ENST00000522387 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
PABPC1-219ENST00000522387 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 402 ms