RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941		A6NED7	52 aa		3.01	□□□□□ -1.93
CTNNA1-231	ENST00000521941	MT1G	P13640	62 aa		2.98	□□□□□ -1.93
CTNNA1-231	ENST00000521941	MT1L	Q93083	61 aa		2.98	□□□□□ -1.93
CTNNA1-231	ENST00000521941	PP632	Q6XCG6	107 aa		2.97	□□□□□ -1.93
CTNNA1-231	ENST00000521941	MT1M	Q8N339	61 aa		2.96	□□□□□ -1.94
CTNNA1-231	ENST00000521941	KRTAP25-1	Q3LHN0	102 aa		2.95	□□□□□ -1.94
CTNNA1-231	ENST00000521941	KRTAP12-3	P60328	96 aa		2.94	□□□□□ -1.94
CTNNA1-231	ENST00000521941	RPS28	P62857	69 aa	Known RBP	2.93	□□□□□ -1.94
CTNNA1-231	ENST00000521941	DST	Q03001	7570 aa	Known RBP	2.93	□□□□□ -1.94
CTNNA1-231	ENST00000521941	KRTAP4-3	Q9BYR4	195 aa		2.92	□□□□□ -1.94
CTNNA1-231	ENST00000521941	KRTAP4-9	Q9BYQ8	210 aa		2.88	□□□□□ -1.95
CTNNA1-231	ENST00000521941	CDC42SE1	Q9NRR8	79 aa		2.88	□□□□□ -1.95
CTNNA1-231	ENST00000521941	KRTAP4-7	Q9BYR0	210 aa		2.87	□□□□□ -1.95
CTNNA1-231	ENST00000521941	ROMO1	P60602	79 aa		2.83	□□□□□ -1.96
CTNNA1-231	ENST00000521941	MT4	P47944	62 aa		2.81	□□□□□ -1.96
CTNNA1-231	ENST00000521941	LCE1D	Q5T752	114 aa		2.8	□□□□□ -1.96
CTNNA1-231	ENST00000521941	KRTAP23-1	A1A580	65 aa		2.79	□□□□□ -1.96
CTNNA1-231	ENST00000521941	LCE4A	Q5TA78	99 aa		2.79	□□□□□ -1.96
CTNNA1-231	ENST00000521941	KRTAP15-1	Q3LI76	137 aa		2.76	□□□□□ -1.97
CTNNA1-231	ENST00000521941	KRTAP5-4	Q6L8H1	288 aa		2.73	□□□□□ -1.97
CTNNA1-231	ENST00000521941	LOC100996750	A0A140TA64	210 aa		2.72	□□□□□ -1.97
CTNNA1-231	ENST00000521941	LCE3C	Q5T5A8	94 aa		2.7	□□□□□ -1.98
CTNNA1-231	ENST00000521941	KRTAP4-6	Q9BYQ5	205 aa		2.7	□□□□□ -1.98
CTNNA1-231	ENST00000521941	KRTAP19-4	Q3LI73	84 aa		2.68	□□□□□ -1.98
CTNNA1-231	ENST00000521941	BRK1	Q8WUW1	75 aa		2.68	□□□□□ -1.98
CTNNA1-231	ENST00000521941	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.67	□□□□□ -1.98
CTNNA1-231	ENST00000521941	HMCN1	Q96RW7	5635 aa		2.66	□□□□□ -1.98
CTNNA1-231	ENST00000521941	KRTAP12-4	P60329	112 aa		2.61	□□□□□ -1.99
CTNNA1-231	ENST00000521941	KRTAP20-2	Q3LI61	65 aa		2.61	□□□□□ -1.99
CTNNA1-231	ENST00000521941	SPRR5	A0A1B0GTR4	108 aa		2.56	□□□□□ -2
CTNNA1-231	ENST00000521941	KRTAP9-6	A8MVA2	160 aa		2.55	□□□□□ -2
CTNNA1-231	ENST00000521941	GPR98	Q8WXG9	6306 aa		2.55	□□□□□ -2
CTNNA1-231	ENST00000521941	SYNE1	Q8NF91	8797 aa	Known RBP	2.55	□□□□□ -2
CTNNA1-231	ENST00000521941	MT1A	P04731	61 aa		2.54	□□□□□ -2
CTNNA1-231	ENST00000521941	KRTAP6-1	Q3LI64	71 aa		2.53	□□□□□ -2
CTNNA1-231	ENST00000521941	KRTAP5-10	Q6L8G5	202 aa		2.53	□□□□□ -2
CTNNA1-231	ENST00000521941	AHNAK2	Q8IVF2	5795 aa		2.53	□□□□□ -2
CTNNA1-231	ENST00000521941	KRTAP5-3	Q6L8H2	238 aa		2.5	□□□□□ -2.01
CTNNA1-231	ENST00000521941	PMAIP1	Q13794	54 aa		2.49	□□□□□ -2.01
CTNNA1-231	ENST00000521941	KRTAP9-4	Q9BYQ2	154 aa		2.43	□□□□□ -2.02
CTNNA1-231	ENST00000521941	PRAC1	Q96KF2	57 aa		2.42	□□□□□ -2.02
CTNNA1-231	ENST00000521941	KRTAP5-7	Q6L8G8	165 aa		2.41	□□□□□ -2.02
CTNNA1-231	ENST00000521941	KRTAP5-2	Q701N4	177 aa		2.41	□□□□□ -2.02
CTNNA1-231	ENST00000521941	KRTAP6-2	Q3LI66	62 aa		2.4	□□□□□ -2.03
CTNNA1-231	ENST00000521941	KRTAP4-11	Q9BYQ6	195 aa		2.35	□□□□□ -2.03
CTNNA1-231	ENST00000521941	PRO0628	Q9UI54	55 aa		2.34	□□□□□ -2.03
CTNNA1-231	ENST00000521941	MT3	P25713	68 aa		2.31	□□□□□ -2.04
CTNNA1-231	ENST00000521941	KRTAP5-8	O75690	187 aa		2.27	□□□□□ -2.05
CTNNA1-231	ENST00000521941	OBSCN	Q5VST9	7968 aa		2.26	□□□□□ -2.05
CTNNA1-231	ENST00000521941	KTN1-AS1	Q86SY8	53 aa		2.25	□□□□□ -2.05
CTNNA1-231	ENST00000521941	SVIP	Q8NHG7	77 aa		2.22	□□□□□ -2.05
CTNNA1-231	ENST00000521941	KRTAP5-1	Q6L8H4	278 aa		2.15	□□□□□ -2.07
CTNNA1-231	ENST00000521941	KRTAP9-9	Q9BYP9	154 aa		2.15	□□□□□ -2.07
CTNNA1-231	ENST00000521941	LCE1E	Q5T753	118 aa		2.06	□□□□□ -2.08
CTNNA1-231	ENST00000521941	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.05	□□□□□ -2.08
CTNNA1-231	ENST00000521941	MUC5AC	P98088	5654 aa		2.04	□□□□□ -2.08
CTNNA1-231	ENST00000521941	LCE1B	Q5T7P3	118 aa		2.02	□□□□□ -2.09
CTNNA1-231	ENST00000521941	LUZP6	Q538Z0	58 aa		2.01	□□□□□ -2.09
CTNNA1-231	ENST00000521941	LCE3D	Q9BYE3	92 aa		1.97	□□□□□ -2.09
CTNNA1-231	ENST00000521941	KRTAP4-2	Q9BYR5	136 aa		1.97	□□□□□ -2.09
CTNNA1-231	ENST00000521941	AHNAK	Q09666	5890 aa	Known RBP	1.97	□□□□□ -2.09
CTNNA1-231	ENST00000521941	LCE1C	Q5T751	118 aa		1.92	□□□□□ -2.1
CTNNA1-231	ENST00000521941	LCE3E	Q5T5B0	92 aa		1.86	□□□□□ -2.11
CTNNA1-231	ENST00000521941	KRTAP4-12	Q9BQ66	201 aa		1.81	□□□□□ -2.12
CTNNA1-231	ENST00000521941	KRTAP5-11	Q6L8G4	156 aa		1.75	□□□□□ -2.13
CTNNA1-231	ENST00000521941	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	1.75	□□□□□ -2.13
CTNNA1-231	ENST00000521941	NDUFAF8	A1L188	74 aa		1.69	□□□□□ -2.14
CTNNA1-231	ENST00000521941	LCE1F	Q5T754	118 aa		1.65	□□□□□ -2.15
CTNNA1-231	ENST00000521941	KRTAP21-2	Q3LI59	83 aa		1.64	□□□□□ -2.15
CTNNA1-231	ENST00000521941	KRTAP4-4	Q9BYR3	166 aa		1.55	□□□□□ -2.16
CTNNA1-231	ENST00000521941	PHGR1	C9JFL3	82 aa		1.5	□□□□□ -2.17
CTNNA1-231	ENST00000521941		H3BS24	57 aa		1.5	□□□□□ -2.17
CTNNA1-231	ENST00000521941	PRM1	P04553	51 aa		1.48	□□□□□ -2.17
CTNNA1-231	ENST00000521941	MUC19	Q7Z5P9	8384 aa		1.38	□□□□□ -2.19
CTNNA1-231	ENST00000521941		A0A0A0MQY5	61 aa		1.35	□□□□□ -2.19
CTNNA1-231	ENST00000521941	INE1	O15225	51 aa		1.32	□□□□□ -2.2
CTNNA1-231	ENST00000521941	KRTAP21-1	Q3LI58	79 aa		1.11	□□□□□ -2.23
CTNNA1-231	ENST00000521941	MUC16	Q8WXI7	14507 aa		0.95	□□□□□ -2.26

Retrieved 78 of 20,778 RNA–protein pairs in 70.6 ms