RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 MT1EP04732 61 aa3.53□□□□□ -1.84
CLK4-209ENST00000521621 SPRR2DP22532 72 aa3.53□□□□□ -1.84
CLK4-209ENST00000521621 TNP1P09430 55 aa3.52□□□□□ -1.85
CLK4-209ENST00000521621 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
CLK4-209ENST00000521621 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
CLK4-209ENST00000521621 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
CLK4-209ENST00000521621 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
CLK4-209ENST00000521621 KRTAP4-7Q9BYR0 210 aa3.5□□□□□ -1.85
CLK4-209ENST00000521621 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
CLK4-209ENST00000521621 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.86
CLK4-209ENST00000521621 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
CLK4-209ENST00000521621 K7ERS5 55 aa3.45□□□□□ -1.86
CLK4-209ENST00000521621 MT1GP13640 62 aa3.45□□□□□ -1.86
CLK4-209ENST00000521621 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
CLK4-209ENST00000521621 KRTAP23-1A1A580 65 aa3.43□□□□□ -1.86
CLK4-209ENST00000521621 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
CLK4-209ENST00000521621 PSPHP1O15172 72 aa3.42□□□□□ -1.86
CLK4-209ENST00000521621 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
CLK4-209ENST00000521621 MT1LQ93083 61 aa3.39□□□□□ -1.87
CLK4-209ENST00000521621 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
CLK4-209ENST00000521621 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
CLK4-209ENST00000521621 A6NED7 52 aa3.35□□□□□ -1.87
CLK4-209ENST00000521621 MT1MQ8N339 61 aa3.35□□□□□ -1.87
CLK4-209ENST00000521621 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
CLK4-209ENST00000521621 CDC42SE1Q9NRR8 79 aa3.3□□□□□ -1.88
CLK4-209ENST00000521621 ROMO1P60602 79 aa3.24□□□□□ -1.89
CLK4-209ENST00000521621 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
CLK4-209ENST00000521621 PRO0628Q9UI54 55 aa3.19□□□□□ -1.9
CLK4-209ENST00000521621 KRTAP15-1Q3LI76 137 aa3.17□□□□□ -1.9
CLK4-209ENST00000521621 PRAC1Q96KF2 57 aa3.16□□□□□ -1.9
CLK4-209ENST00000521621 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.91
CLK4-209ENST00000521621 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
CLK4-209ENST00000521621 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
CLK4-209ENST00000521621 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
CLK4-209ENST00000521621 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
CLK4-209ENST00000521621 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
CLK4-209ENST00000521621 MT4P47944 62 aa3□□□□□ -1.93
CLK4-209ENST00000521621 HMCN1Q96RW7 5635 aa2.97□□□□□ -1.93
CLK4-209ENST00000521621 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
CLK4-209ENST00000521621 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
CLK4-209ENST00000521621 BRK1Q8WUW1 75 aa2.95□□□□□ -1.94
CLK4-209ENST00000521621 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
CLK4-209ENST00000521621 MT1AP04731 61 aa2.92□□□□□ -1.94
CLK4-209ENST00000521621 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
CLK4-209ENST00000521621 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
CLK4-209ENST00000521621 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
CLK4-209ENST00000521621 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
CLK4-209ENST00000521621 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
CLK4-209ENST00000521621 KTN1-AS1Q86SY8 53 aa2.84□□□□□ -1.95
CLK4-209ENST00000521621 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
CLK4-209ENST00000521621 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
CLK4-209ENST00000521621 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
CLK4-209ENST00000521621 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
CLK4-209ENST00000521621 KRTAP6-2Q3LI66 62 aa2.66□□□□□ -1.98
CLK4-209ENST00000521621 MT3P25713 68 aa2.66□□□□□ -1.98
CLK4-209ENST00000521621 KRTAP5-8O75690 187 aa2.59□□□□□ -2
CLK4-209ENST00000521621 NDUFAF8A1L188 74 aa2.58□□□□□ -2
CLK4-209ENST00000521621 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
CLK4-209ENST00000521621 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
CLK4-209ENST00000521621 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
CLK4-209ENST00000521621 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
CLK4-209ENST00000521621 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
CLK4-209ENST00000521621 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
CLK4-209ENST00000521621 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
CLK4-209ENST00000521621 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
CLK4-209ENST00000521621 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
CLK4-209ENST00000521621 LCE3DQ9BYE3 92 aa2.24□□□□□ -2.05
CLK4-209ENST00000521621 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
CLK4-209ENST00000521621 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
CLK4-209ENST00000521621 LCE3EQ5T5B0 92 aa2.14□□□□□ -2.07
CLK4-209ENST00000521621 INE1O15225 51 aa1.95□□□□□ -2.1
CLK4-209ENST00000521621 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CLK4-209ENST00000521621 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
CLK4-209ENST00000521621 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
CLK4-209ENST00000521621 PRM1P04553 51 aa1.6□□□□□ -2.15
CLK4-209ENST00000521621 MUC19Q7Z5P9 8384 aa1.32□□□□□ -2.2
CLK4-209ENST00000521621 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
CLK4-209ENST00000521621 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 40.4 ms