RNA–Protein interactions for RNA: ENST00000521438.1

NDRG1-218, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-218ENST00000521438 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
NDRG1-218ENST00000521438 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
NDRG1-218ENST00000521438 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
NDRG1-218ENST00000521438 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
NDRG1-218ENST00000521438 MT1EP04732 61 aa3.63□□□□□ -1.83
NDRG1-218ENST00000521438 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.84
NDRG1-218ENST00000521438 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.84
NDRG1-218ENST00000521438 MT1LQ93083 61 aa3.57□□□□□ -1.84
NDRG1-218ENST00000521438 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
NDRG1-218ENST00000521438 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
NDRG1-218ENST00000521438 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.5□□□□□ -1.85
NDRG1-218ENST00000521438 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
NDRG1-218ENST00000521438 LCE5AQ5TCM9 118 aa3.48□□□□□ -1.85
NDRG1-218ENST00000521438 LOC100996750A0A140TA64 210 aa3.47□□□□□ -1.85
NDRG1-218ENST00000521438 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
NDRG1-218ENST00000521438 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
NDRG1-218ENST00000521438 MT1MQ8N339 61 aa3.43□□□□□ -1.86
NDRG1-218ENST00000521438 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
NDRG1-218ENST00000521438 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
NDRG1-218ENST00000521438 MT1GP13640 62 aa3.41□□□□□ -1.86
NDRG1-218ENST00000521438 SPRR2EP22531 72 aa3.4□□□□□ -1.86
NDRG1-218ENST00000521438 SPRR2BP35325 72 aa3.4□□□□□ -1.86
NDRG1-218ENST00000521438 SPRR2AP35326 72 aa3.4□□□□□ -1.86
NDRG1-218ENST00000521438 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
NDRG1-218ENST00000521438 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
NDRG1-218ENST00000521438 SYNE1Q8NF91 8797 aaKnown RBP3.35□□□□□ -1.87
NDRG1-218ENST00000521438 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
NDRG1-218ENST00000521438 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
NDRG1-218ENST00000521438 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
NDRG1-218ENST00000521438 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
NDRG1-218ENST00000521438 SPRR2DP22532 72 aa3.25□□□□□ -1.89
NDRG1-218ENST00000521438 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
NDRG1-218ENST00000521438 NEBP20929 6669 aa3.24□□□□□ -1.89
NDRG1-218ENST00000521438 LCE3BQ5TA77 95 aa3.11□□□□□ -1.91
NDRG1-218ENST00000521438 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
NDRG1-218ENST00000521438 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
NDRG1-218ENST00000521438 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
NDRG1-218ENST00000521438 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
NDRG1-218ENST00000521438 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
NDRG1-218ENST00000521438 MT1AP04731 61 aa2.97□□□□□ -1.93
NDRG1-218ENST00000521438 MT4P47944 62 aa2.96□□□□□ -1.94
NDRG1-218ENST00000521438 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
NDRG1-218ENST00000521438 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
NDRG1-218ENST00000521438 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
NDRG1-218ENST00000521438 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
NDRG1-218ENST00000521438 MT3P25713 68 aa2.87□□□□□ -1.95
NDRG1-218ENST00000521438 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
NDRG1-218ENST00000521438 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
NDRG1-218ENST00000521438 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
NDRG1-218ENST00000521438 LCE1DQ5T752 114 aa2.81□□□□□ -1.96
NDRG1-218ENST00000521438 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
NDRG1-218ENST00000521438 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
NDRG1-218ENST00000521438 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
NDRG1-218ENST00000521438 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
NDRG1-218ENST00000521438 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
NDRG1-218ENST00000521438 PRM1P04553 51 aa2.68□□□□□ -1.98
NDRG1-218ENST00000521438 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
NDRG1-218ENST00000521438 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
NDRG1-218ENST00000521438 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
NDRG1-218ENST00000521438 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
NDRG1-218ENST00000521438 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
NDRG1-218ENST00000521438 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
NDRG1-218ENST00000521438 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
NDRG1-218ENST00000521438 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
NDRG1-218ENST00000521438 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
NDRG1-218ENST00000521438 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
NDRG1-218ENST00000521438 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
NDRG1-218ENST00000521438 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
NDRG1-218ENST00000521438 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
NDRG1-218ENST00000521438 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
NDRG1-218ENST00000521438 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
NDRG1-218ENST00000521438 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
NDRG1-218ENST00000521438 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
NDRG1-218ENST00000521438 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.1
NDRG1-218ENST00000521438 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
NDRG1-218ENST00000521438 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
NDRG1-218ENST00000521438 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
NDRG1-218ENST00000521438 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms