RNA–Protein interactions for RNA: ENST00000521078.1

RUNX1T1-231, Transcript of RUNX1 translocation partner 1, human

TSL 2

Gene RUNX1T1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-231	ENST00000521078	KRTAP12-1	P59990	96 aa		4.89	□□□□□ -1.63
RUNX1T1-231	ENST00000521078	SMIM26	A0A096LP01	95 aa		4.87	□□□□□ -1.63
RUNX1T1-231	ENST00000521078		A8MU10	97 aa		4.86	□□□□□ -1.63
RUNX1T1-231	ENST00000521078	KRTAP2-3	P0C7H8	128 aa		4.86	□□□□□ -1.63
RUNX1T1-231	ENST00000521078	KRTAP2-4	Q9BYR9	128 aa		4.86	□□□□□ -1.63
RUNX1T1-231	ENST00000521078	TMEM258	P61165	79 aa		4.84	□□□□□ -1.63
RUNX1T1-231	ENST00000521078	PRR15L	Q9BU68	103 aa		4.84	□□□□□ -1.63
RUNX1T1-231	ENST00000521078	LINC01558	Q9Y6Z2	57 aa		4.81	□□□□□ -1.64
RUNX1T1-231	ENST00000521078	SPRR2D	P22532	72 aa		4.8	□□□□□ -1.64
RUNX1T1-231	ENST00000521078	KRTAP19-7	Q3SYF9	63 aa		4.72	□□□□□ -1.65
RUNX1T1-231	ENST00000521078	LCE1E	Q5T753	118 aa		4.71	□□□□□ -1.66
RUNX1T1-231	ENST00000521078	KRTAP2-1	Q9BYU5	128 aa		4.71	□□□□□ -1.66
RUNX1T1-231	ENST00000521078	UQCR11	O14957	56 aa		4.68	□□□□□ -1.66
RUNX1T1-231	ENST00000521078	MT1E	P04732	61 aa		4.68	□□□□□ -1.66
RUNX1T1-231	ENST00000521078	C10orf95	Q9H7T3	257 aa		4.66	□□□□□ -1.66
RUNX1T1-231	ENST00000521078	TNP1	P09430	55 aa		4.64	□□□□□ -1.67
RUNX1T1-231	ENST00000521078	KRTAP19-5	Q3LI72	72 aa		4.63	□□□□□ -1.67
RUNX1T1-231	ENST00000521078	KRTAP19-3	Q7Z4W3	81 aa		4.62	□□□□□ -1.67
RUNX1T1-231	ENST00000521078	MIR22HG	Q0VDD5	57 aa		4.58	□□□□□ -1.68
RUNX1T1-231	ENST00000521078		V9GYY9	64 aa		4.58	□□□□□ -1.68
RUNX1T1-231	ENST00000521078	LCE3A	Q5TA76	89 aa		4.57	□□□□□ -1.68
RUNX1T1-231	ENST00000521078	PSPHP1	O15172	72 aa		4.54	□□□□□ -1.68
RUNX1T1-231	ENST00000521078		Q1T7F1	81 aa		4.54	□□□□□ -1.68
RUNX1T1-231	ENST00000521078	MT1G	P13640	62 aa		4.53	□□□□□ -1.68
RUNX1T1-231	ENST00000521078		K7ERS5	55 aa		4.49	□□□□□ -1.69
RUNX1T1-231	ENST00000521078	LCE3E	Q5T5B0	92 aa		4.49	□□□□□ -1.69
RUNX1T1-231	ENST00000521078	PP632	Q6XCG6	107 aa		4.49	□□□□□ -1.69
RUNX1T1-231	ENST00000521078	MT1L	Q93083	61 aa		4.49	□□□□□ -1.69
RUNX1T1-231	ENST00000521078	DST	Q03001	7570 aa	Known RBP	4.47	□□□□□ -1.69
RUNX1T1-231	ENST00000521078	MT1M	Q8N339	61 aa		4.45	□□□□□ -1.7
RUNX1T1-231	ENST00000521078	KRTAP25-1	Q3LHN0	102 aa		4.42	□□□□□ -1.7
RUNX1T1-231	ENST00000521078		A6NED7	52 aa		4.4	□□□□□ -1.71
RUNX1T1-231	ENST00000521078	KRTAP12-3	P60328	96 aa		4.4	□□□□□ -1.71
RUNX1T1-231	ENST00000521078	RPS28	P62857	69 aa	Known RBP	4.38	□□□□□ -1.71
RUNX1T1-231	ENST00000521078	KRTAP5-11	Q6L8G4	156 aa		4.38	□□□□□ -1.71
RUNX1T1-231	ENST00000521078	KRTAP4-3	Q9BYR4	195 aa		4.33	□□□□□ -1.72
RUNX1T1-231	ENST00000521078	KRTAP9-6	A8MVA2	160 aa		4.32	□□□□□ -1.72
RUNX1T1-231	ENST00000521078	CDC42SE1	Q9NRR8	79 aa		4.25	□□□□□ -1.73
RUNX1T1-231	ENST00000521078	MT4	P47944	62 aa		4.19	□□□□□ -1.74
RUNX1T1-231	ENST00000521078	ROMO1	P60602	79 aa		4.19	□□□□□ -1.74
RUNX1T1-231	ENST00000521078	LUZP6	Q538Z0	58 aa		4.18	□□□□□ -1.74
RUNX1T1-231	ENST00000521078	KRTAP5-4	Q6L8H1	288 aa		4.18	□□□□□ -1.74
RUNX1T1-231	ENST00000521078	PRO0628	Q9UI54	55 aa		4.18	□□□□□ -1.74
RUNX1T1-231	ENST00000521078	HMCN1	Q96RW7	5635 aa		4.15	□□□□□ -1.75
RUNX1T1-231	ENST00000521078	GPR98	Q8WXG9	6306 aa		4.1	□□□□□ -1.75
RUNX1T1-231	ENST00000521078	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.07	□□□□□ -1.76
RUNX1T1-231	ENST00000521078	AHNAK2	Q8IVF2	5795 aa		4.01	□□□□□ -1.77
RUNX1T1-231	ENST00000521078	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.99	□□□□□ -1.77
RUNX1T1-231	ENST00000521078	SPRR5	A0A1B0GTR4	108 aa		3.96	□□□□□ -1.78
RUNX1T1-231	ENST00000521078	KRTAP12-4	P60329	112 aa		3.95	□□□□□ -1.78
RUNX1T1-231	ENST00000521078	SYNE1	Q8NF91	8797 aa	Known RBP	3.94	□□□□□ -1.78
RUNX1T1-231	ENST00000521078	KRTAP20-2	Q3LI61	65 aa		3.94	□□□□□ -1.78
RUNX1T1-231	ENST00000521078	KRTAP5-10	Q6L8G5	202 aa		3.87	□□□□□ -1.79
RUNX1T1-231	ENST00000521078	BRK1	Q8WUW1	75 aa		3.86	□□□□□ -1.79
RUNX1T1-231	ENST00000521078	LCE3D	Q9BYE3	92 aa		3.83	□□□□□ -1.8
RUNX1T1-231	ENST00000521078	MT1A	P04731	61 aa		3.82	□□□□□ -1.8
RUNX1T1-231	ENST00000521078	KRTAP6-1	Q3LI64	71 aa		3.79	□□□□□ -1.8
RUNX1T1-231	ENST00000521078	KRTAP5-7	Q6L8G8	165 aa		3.71	□□□□□ -1.82
RUNX1T1-231	ENST00000521078	KRTAP5-2	Q701N4	177 aa		3.68	□□□□□ -1.82
RUNX1T1-231	ENST00000521078	PMAIP1	Q13794	54 aa		3.63	□□□□□ -1.83
RUNX1T1-231	ENST00000521078	KRTAP6-2	Q3LI66	62 aa		3.6	□□□□□ -1.83
RUNX1T1-231	ENST00000521078	KRTAP5-1	Q6L8H4	278 aa		3.56	□□□□□ -1.84
RUNX1T1-231	ENST00000521078	KRTAP5-8	O75690	187 aa		3.45	□□□□□ -1.86
RUNX1T1-231	ENST00000521078	OBSCN	Q5VST9	7968 aa		3.39	□□□□□ -1.87
RUNX1T1-231	ENST00000521078	KRTAP4-4	Q9BYR3	166 aa		3.32	□□□□□ -1.88
RUNX1T1-231	ENST00000521078	MUC5AC	P98088	5654 aa		3.26	□□□□□ -1.89
RUNX1T1-231	ENST00000521078	KTN1-AS1	Q86SY8	53 aa		3.25	□□□□□ -1.89
RUNX1T1-231	ENST00000521078	AHNAK	Q09666	5890 aa	Known RBP	3.25	□□□□□ -1.89
RUNX1T1-231	ENST00000521078	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.24	□□□□□ -1.89
RUNX1T1-231	ENST00000521078	LCE1C	Q5T751	118 aa		3.16	□□□□□ -1.9
RUNX1T1-231	ENST00000521078	LCE1B	Q5T7P3	118 aa		3.16	□□□□□ -1.9
RUNX1T1-231	ENST00000521078	KRTAP21-2	Q3LI59	83 aa		2.49	□□□□□ -2.01
RUNX1T1-231	ENST00000521078	MUC19	Q7Z5P9	8384 aa		2.42	□□□□□ -2.02
RUNX1T1-231	ENST00000521078	PHGR1	C9JFL3	82 aa		2.3	□□□□□ -2.04
RUNX1T1-231	ENST00000521078	INE1	O15225	51 aa		2.22	□□□□□ -2.05
RUNX1T1-231	ENST00000521078	PRM1	P04553	51 aa		2.15	□□□□□ -2.07
RUNX1T1-231	ENST00000521078	KRTAP21-1	Q3LI58	79 aa		1.71	□□□□□ -2.14
RUNX1T1-231	ENST00000521078	MUC16	Q8WXI7	14507 aa		1.55	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 62.3 ms