RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
SREK1-209ENST00000520953 MDN1Q9NU22 5596 aa5.5□□□□□ -1.53
SREK1-209ENST00000520953 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
SREK1-209ENST00000520953 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
SREK1-209ENST00000520953 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.53
SREK1-209ENST00000520953 MT1LQ93083 61 aa5.38□□□□□ -1.55
SREK1-209ENST00000520953 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
SREK1-209ENST00000520953 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
SREK1-209ENST00000520953 SPRR2EP22531 72 aa5.31□□□□□ -1.56
SREK1-209ENST00000520953 SPRR2BP35325 72 aa5.31□□□□□ -1.56
SREK1-209ENST00000520953 SPRR2AP35326 72 aa5.31□□□□□ -1.56
SREK1-209ENST00000520953 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
SREK1-209ENST00000520953 NEBP20929 6669 aa5.25□□□□□ -1.57
SREK1-209ENST00000520953 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
SREK1-209ENST00000520953 MT1GP13640 62 aa5.21□□□□□ -1.58
SREK1-209ENST00000520953 MT1MQ8N339 61 aa5.21□□□□□ -1.58
SREK1-209ENST00000520953 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
SREK1-209ENST00000520953 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
SREK1-209ENST00000520953 LOC100996750A0A140TA64 210 aa5.16□□□□□ -1.58
SREK1-209ENST00000520953 KRTAP4-6Q9BYQ5 205 aa5.16□□□□□ -1.58
SREK1-209ENST00000520953 A0A0A0MQY5 61 aa5.14□□□□□ -1.59
SREK1-209ENST00000520953 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
SREK1-209ENST00000520953 SPRR2DP22532 72 aa5.11□□□□□ -1.59
SREK1-209ENST00000520953 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
SREK1-209ENST00000520953 KRTAP9-6A8MVA2 160 aa4.99□□□□□ -1.61
SREK1-209ENST00000520953 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
SREK1-209ENST00000520953 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
SREK1-209ENST00000520953 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
SREK1-209ENST00000520953 KRTAP20-1Q3LI63 56 aa4.81□□□□□ -1.64
SREK1-209ENST00000520953 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.65
SREK1-209ENST00000520953 KRTAP2-2Q9BYT5 123 aa4.71□□□□□ -1.66
SREK1-209ENST00000520953 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
SREK1-209ENST00000520953 INE1O15225 51 aa4.58□□□□□ -1.68
SREK1-209ENST00000520953 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
SREK1-209ENST00000520953 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
SREK1-209ENST00000520953 KRTAP5-4Q6L8H1 288 aa4.56□□□□□ -1.68
SREK1-209ENST00000520953 MT1AP04731 61 aa4.53□□□□□ -1.68
SREK1-209ENST00000520953 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
SREK1-209ENST00000520953 MT4P47944 62 aa4.49□□□□□ -1.69
SREK1-209ENST00000520953 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
SREK1-209ENST00000520953 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
SREK1-209ENST00000520953 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
SREK1-209ENST00000520953 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
SREK1-209ENST00000520953 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
SREK1-209ENST00000520953 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
SREK1-209ENST00000520953 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
SREK1-209ENST00000520953 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
SREK1-209ENST00000520953 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
SREK1-209ENST00000520953 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
SREK1-209ENST00000520953 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
SREK1-209ENST00000520953 MT3P25713 68 aa4.09□□□□□ -1.76
SREK1-209ENST00000520953 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
SREK1-209ENST00000520953 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
SREK1-209ENST00000520953 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
SREK1-209ENST00000520953 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
SREK1-209ENST00000520953 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
SREK1-209ENST00000520953 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
SREK1-209ENST00000520953 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
SREK1-209ENST00000520953 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
SREK1-209ENST00000520953 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
SREK1-209ENST00000520953 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
SREK1-209ENST00000520953 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
SREK1-209ENST00000520953 PRM1P04553 51 aa3.56□□□□□ -1.84
SREK1-209ENST00000520953 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
SREK1-209ENST00000520953 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
SREK1-209ENST00000520953 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
SREK1-209ENST00000520953 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
SREK1-209ENST00000520953 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
SREK1-209ENST00000520953 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
SREK1-209ENST00000520953 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
SREK1-209ENST00000520953 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
SREK1-209ENST00000520953 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
SREK1-209ENST00000520953 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
SREK1-209ENST00000520953 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
SREK1-209ENST00000520953 PHGR1C9JFL3 82 aa2.57□□□□□ -2
SREK1-209ENST00000520953 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
SREK1-209ENST00000520953 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
SREK1-209ENST00000520953 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 70.5 ms