RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 AHNAK2Q8IVF2 5795 aa6.76□□□□□ -1.33
PABPC1-215ENST00000520804 KRTAP4-6Q9BYQ5 205 aa6.73□□□□□ -1.33
PABPC1-215ENST00000520804 KRTAP5-10Q6L8G5 202 aa6.68□□□□□ -1.34
PABPC1-215ENST00000520804 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
PABPC1-215ENST00000520804 KRTAP12-3P60328 96 aa6.59□□□□□ -1.35
PABPC1-215ENST00000520804 PRR15LQ9BU68 103 aa6.56□□□□□ -1.36
PABPC1-215ENST00000520804 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
PABPC1-215ENST00000520804 KRTAP5-3Q6L8H2 238 aa6.47□□□□□ -1.37
PABPC1-215ENST00000520804 KRTAP5-5Q701N2 237 aaPredicted RBP6.46□□□□□ -1.38
PABPC1-215ENST00000520804 KRTAP20-2Q3LI61 65 aa6.45□□□□□ -1.38
PABPC1-215ENST00000520804 KRTAP5-7Q6L8G8 165 aa6.45□□□□□ -1.38
PABPC1-215ENST00000520804 LINC01558Q9Y6Z2 57 aa6.45□□□□□ -1.38
PABPC1-215ENST00000520804 ATP5EP56381 51 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-215ENST00000520804 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.38
PABPC1-215ENST00000520804 CCDC179H3BU77 68 aa6.4□□□□□ -1.38
PABPC1-215ENST00000520804 UQCR11O14957 56 aa6.34□□□□□ -1.39
PABPC1-215ENST00000520804 KRTAP12-4P60329 112 aa6.33□□□□□ -1.4
PABPC1-215ENST00000520804 KRTAP25-1Q3LHN0 102 aa6.3□□□□□ -1.4
PABPC1-215ENST00000520804 LOC100996750A0A140TA64 210 aa6.28□□□□□ -1.4
PABPC1-215ENST00000520804 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
PABPC1-215ENST00000520804 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
PABPC1-215ENST00000520804 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
PABPC1-215ENST00000520804 TMEM258P61165 79 aa6.14□□□□□ -1.43
PABPC1-215ENST00000520804 K7ERS5 55 aa6.1□□□□□ -1.43
PABPC1-215ENST00000520804 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
PABPC1-215ENST00000520804 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
PABPC1-215ENST00000520804 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
PABPC1-215ENST00000520804 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
PABPC1-215ENST00000520804 KRTAP5-2Q701N4 177 aa5.94□□□□□ -1.46
PABPC1-215ENST00000520804 MT1AP04731 61 aa5.93□□□□□ -1.46
PABPC1-215ENST00000520804 KRTAP6-1Q3LI64 71 aa5.91□□□□□ -1.46
PABPC1-215ENST00000520804 PSPHP1O15172 72 aa5.9□□□□□ -1.46
PABPC1-215ENST00000520804 V9GYY9 64 aa5.87□□□□□ -1.47
PABPC1-215ENST00000520804 Q1T7F1 81 aa5.82□□□□□ -1.48
PABPC1-215ENST00000520804 KRTAP5-8O75690 187 aa5.76□□□□□ -1.49
PABPC1-215ENST00000520804 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
PABPC1-215ENST00000520804 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
PABPC1-215ENST00000520804 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
PABPC1-215ENST00000520804 A6NED7 52 aa5.69□□□□□ -1.5
PABPC1-215ENST00000520804 KRTAP6-2Q3LI66 62 aa5.69□□□□□ -1.5
PABPC1-215ENST00000520804 RPS28P62857 69 aaKnown RBP5.67□□□□□ -1.5
PABPC1-215ENST00000520804 OBSCNQ5VST9 7968 aa5.65□□□□□ -1.51
PABPC1-215ENST00000520804 ROMO1P60602 79 aa5.64□□□□□ -1.51
PABPC1-215ENST00000520804 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
PABPC1-215ENST00000520804 MUC5ACP98088 5654 aa5.6□□□□□ -1.51
PABPC1-215ENST00000520804 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
PABPC1-215ENST00000520804 PCP4P48539 62 aa5.5□□□□□ -1.53
PABPC1-215ENST00000520804 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
PABPC1-215ENST00000520804 MT3P25713 68 aa5.44□□□□□ -1.54
PABPC1-215ENST00000520804 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
PABPC1-215ENST00000520804 LCE1EQ5T753 118 aa5.06□□□□□ -1.6
PABPC1-215ENST00000520804 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
PABPC1-215ENST00000520804 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
PABPC1-215ENST00000520804 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
PABPC1-215ENST00000520804 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
PABPC1-215ENST00000520804 PMAIP1Q13794 54 aa4.44□□□□□ -1.7
PABPC1-215ENST00000520804 KRTAP4-12Q9BQ66 201 aa4.42□□□□□ -1.7
PABPC1-215ENST00000520804 PRO0628Q9UI54 55 aa4.33□□□□□ -1.72
PABPC1-215ENST00000520804 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
PABPC1-215ENST00000520804 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
PABPC1-215ENST00000520804 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
PABPC1-215ENST00000520804 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
PABPC1-215ENST00000520804 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
PABPC1-215ENST00000520804 KTN1-AS1Q86SY8 53 aa4.07□□□□□ -1.76
PABPC1-215ENST00000520804 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
PABPC1-215ENST00000520804 SVIPQ8NHG7 77 aa3.96□□□□□ -1.78
PABPC1-215ENST00000520804 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
PABPC1-215ENST00000520804 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
PABPC1-215ENST00000520804 H3BS24 57 aa3.67□□□□□ -1.82
PABPC1-215ENST00000520804 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
PABPC1-215ENST00000520804 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
PABPC1-215ENST00000520804 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
PABPC1-215ENST00000520804 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
PABPC1-215ENST00000520804 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
PABPC1-215ENST00000520804 PRM1P04553 51 aa2.87□□□□□ -1.95
PABPC1-215ENST00000520804 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
PABPC1-215ENST00000520804 INE1O15225 51 aa2.67□□□□□ -1.98
PABPC1-215ENST00000520804 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms