RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
PCDHA2-202ENST00000520672 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
PCDHA2-202ENST00000520672 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
PCDHA2-202ENST00000520672 MT1EP04732 61 aa4.76□□□□□ -1.65
PCDHA2-202ENST00000520672 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
PCDHA2-202ENST00000520672 MT1LQ93083 61 aa4.72□□□□□ -1.65
PCDHA2-202ENST00000520672 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.65
PCDHA2-202ENST00000520672 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
PCDHA2-202ENST00000520672 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
PCDHA2-202ENST00000520672 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.67
PCDHA2-202ENST00000520672 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
PCDHA2-202ENST00000520672 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
PCDHA2-202ENST00000520672 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
PCDHA2-202ENST00000520672 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
PCDHA2-202ENST00000520672 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
PCDHA2-202ENST00000520672 MT1GP13640 62 aa4.52□□□□□ -1.69
PCDHA2-202ENST00000520672 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
PCDHA2-202ENST00000520672 MT1MQ8N339 61 aa4.48□□□□□ -1.69
PCDHA2-202ENST00000520672 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
PCDHA2-202ENST00000520672 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
PCDHA2-202ENST00000520672 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
PCDHA2-202ENST00000520672 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
PCDHA2-202ENST00000520672 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
PCDHA2-202ENST00000520672 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
PCDHA2-202ENST00000520672 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
PCDHA2-202ENST00000520672 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
PCDHA2-202ENST00000520672 SPRR2EP22531 72 aa4.26□□□□□ -1.73
PCDHA2-202ENST00000520672 SPRR2BP35325 72 aa4.26□□□□□ -1.73
PCDHA2-202ENST00000520672 SPRR2AP35326 72 aa4.26□□□□□ -1.73
PCDHA2-202ENST00000520672 LCE3BQ5TA77 95 aa4.24□□□□□ -1.73
PCDHA2-202ENST00000520672 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
PCDHA2-202ENST00000520672 PRM1P04553 51 aa4.21□□□□□ -1.74
PCDHA2-202ENST00000520672 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
PCDHA2-202ENST00000520672 SPRR2DP22532 72 aa4.07□□□□□ -1.76
PCDHA2-202ENST00000520672 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
PCDHA2-202ENST00000520672 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
PCDHA2-202ENST00000520672 NEBP20929 6669 aa4.01□□□□□ -1.77
PCDHA2-202ENST00000520672 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
PCDHA2-202ENST00000520672 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
PCDHA2-202ENST00000520672 MT1AP04731 61 aa3.93□□□□□ -1.78
PCDHA2-202ENST00000520672 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
PCDHA2-202ENST00000520672 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
PCDHA2-202ENST00000520672 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
PCDHA2-202ENST00000520672 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
PCDHA2-202ENST00000520672 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
PCDHA2-202ENST00000520672 MT4P47944 62 aa3.69□□□□□ -1.82
PCDHA2-202ENST00000520672 MUC19Q7Z5P9 8384 aa3.69□□□□□ -1.82
PCDHA2-202ENST00000520672 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
PCDHA2-202ENST00000520672 MT3P25713 68 aa3.58□□□□□ -1.84
PCDHA2-202ENST00000520672 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
PCDHA2-202ENST00000520672 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
PCDHA2-202ENST00000520672 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
PCDHA2-202ENST00000520672 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
PCDHA2-202ENST00000520672 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
PCDHA2-202ENST00000520672 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
PCDHA2-202ENST00000520672 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
PCDHA2-202ENST00000520672 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.9
PCDHA2-202ENST00000520672 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
PCDHA2-202ENST00000520672 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
PCDHA2-202ENST00000520672 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
PCDHA2-202ENST00000520672 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
PCDHA2-202ENST00000520672 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
PCDHA2-202ENST00000520672 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
PCDHA2-202ENST00000520672 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
PCDHA2-202ENST00000520672 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
PCDHA2-202ENST00000520672 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
PCDHA2-202ENST00000520672 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
PCDHA2-202ENST00000520672 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
PCDHA2-202ENST00000520672 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
PCDHA2-202ENST00000520672 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
PCDHA2-202ENST00000520672 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
PCDHA2-202ENST00000520672 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
PCDHA2-202ENST00000520672 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
PCDHA2-202ENST00000520672 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
PCDHA2-202ENST00000520672 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
PCDHA2-202ENST00000520672 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
PCDHA2-202ENST00000520672 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 36.2 ms