RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 MT1MQ8N339 61 aa5.74□□□□□ -1.49
IGHV3-42-201ENST00000520410 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
IGHV3-42-201ENST00000520410 MT1LQ93083 61 aa5.72□□□□□ -1.49
IGHV3-42-201ENST00000520410 MT4P47944 62 aa5.7□□□□□ -1.5
IGHV3-42-201ENST00000520410 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
IGHV3-42-201ENST00000520410 PRO0628Q9UI54 55 aa5.7□□□□□ -1.5
IGHV3-42-201ENST00000520410 GPR98Q8WXG9 6306 aa5.66□□□□□ -1.5
IGHV3-42-201ENST00000520410 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
IGHV3-42-201ENST00000520410 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
IGHV3-42-201ENST00000520410 Q1T7F1 81 aa5.63□□□□□ -1.51
IGHV3-42-201ENST00000520410 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
IGHV3-42-201ENST00000520410 V9GYY9 64 aa5.54□□□□□ -1.52
IGHV3-42-201ENST00000520410 UQCR11O14957 56 aa5.52□□□□□ -1.53
IGHV3-42-201ENST00000520410 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
IGHV3-42-201ENST00000520410 BRK1Q8WUW1 75 aa5.52□□□□□ -1.53
IGHV3-42-201ENST00000520410 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
IGHV3-42-201ENST00000520410 HMCN1Q96RW7 5635 aa5.46□□□□□ -1.53
IGHV3-42-201ENST00000520410 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
IGHV3-42-201ENST00000520410 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
IGHV3-42-201ENST00000520410 MIR22HGQ0VDD5 57 aa5.41□□□□□ -1.54
IGHV3-42-201ENST00000520410 K7ERS5 55 aa5.4□□□□□ -1.54
IGHV3-42-201ENST00000520410 PSPHP1O15172 72 aa5.4□□□□□ -1.54
IGHV3-42-201ENST00000520410 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
IGHV3-42-201ENST00000520410 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
IGHV3-42-201ENST00000520410 KRTAP25-1Q3LHN0 102 aa5.35□□□□□ -1.55
IGHV3-42-201ENST00000520410 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
IGHV3-42-201ENST00000520410 AHNAK2Q8IVF2 5795 aa5.31□□□□□ -1.56
IGHV3-42-201ENST00000520410 CDC42SE1Q9NRR8 79 aa5.3□□□□□ -1.56
IGHV3-42-201ENST00000520410 KRTAP5-10Q6L8G5 202 aa5.28□□□□□ -1.56
IGHV3-42-201ENST00000520410 A6NED7 52 aa5.23□□□□□ -1.57
IGHV3-42-201ENST00000520410 KRTAP20-2Q3LI61 65 aa5.22□□□□□ -1.57
IGHV3-42-201ENST00000520410 KTN1-AS1Q86SY8 53 aa5.22□□□□□ -1.57
IGHV3-42-201ENST00000520410 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
IGHV3-42-201ENST00000520410 KRTAP5-5Q701N2 237 aaPredicted RBP5.19□□□□□ -1.58
IGHV3-42-201ENST00000520410 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
IGHV3-42-201ENST00000520410 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
IGHV3-42-201ENST00000520410 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
IGHV3-42-201ENST00000520410 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
IGHV3-42-201ENST00000520410 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
IGHV3-42-201ENST00000520410 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
IGHV3-42-201ENST00000520410 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
IGHV3-42-201ENST00000520410 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
IGHV3-42-201ENST00000520410 ROMO1P60602 79 aa4.93□□□□□ -1.62
IGHV3-42-201ENST00000520410 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
IGHV3-42-201ENST00000520410 MT1AP04731 61 aa4.87□□□□□ -1.63
IGHV3-42-201ENST00000520410 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
IGHV3-42-201ENST00000520410 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
IGHV3-42-201ENST00000520410 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
IGHV3-42-201ENST00000520410 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
IGHV3-42-201ENST00000520410 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
IGHV3-42-201ENST00000520410 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
IGHV3-42-201ENST00000520410 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
IGHV3-42-201ENST00000520410 MT3P25713 68 aa4.49□□□□□ -1.69
IGHV3-42-201ENST00000520410 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
IGHV3-42-201ENST00000520410 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
IGHV3-42-201ENST00000520410 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
IGHV3-42-201ENST00000520410 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
IGHV3-42-201ENST00000520410 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
IGHV3-42-201ENST00000520410 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
IGHV3-42-201ENST00000520410 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
IGHV3-42-201ENST00000520410 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
IGHV3-42-201ENST00000520410 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
IGHV3-42-201ENST00000520410 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
IGHV3-42-201ENST00000520410 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
IGHV3-42-201ENST00000520410 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
IGHV3-42-201ENST00000520410 INE1O15225 51 aa3.44□□□□□ -1.86
IGHV3-42-201ENST00000520410 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
IGHV3-42-201ENST00000520410 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
IGHV3-42-201ENST00000520410 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
IGHV3-42-201ENST00000520410 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
IGHV3-42-201ENST00000520410 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
IGHV3-42-201ENST00000520410 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.91
IGHV3-42-201ENST00000520410 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
IGHV3-42-201ENST00000520410 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
IGHV3-42-201ENST00000520410 PRM1P04553 51 aa2.53□□□□□ -2
IGHV3-42-201ENST00000520410 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
IGHV3-42-201ENST00000520410 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 95.1 ms