RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 CRIPTQ9P021 101 aa3.55□□□□□ -1.84
CTHRC1-203ENST00000520337 A0A0D9SG42 100 aa3.54□□□□□ -1.84
CTHRC1-203ENST00000520337 KRTAP10-10P60014 251 aa3.54□□□□□ -1.84
CTHRC1-203ENST00000520337 R4GN34 69 aa3.5□□□□□ -1.85
CTHRC1-203ENST00000520337 KRTAP12-1P59990 96 aa3.49□□□□□ -1.85
CTHRC1-203ENST00000520337 SPINT4Q6UDR6 99 aa3.49□□□□□ -1.85
CTHRC1-203ENST00000520337 SPRR2GQ9BYE4 73 aa3.49□□□□□ -1.85
CTHRC1-203ENST00000520337 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
CTHRC1-203ENST00000520337 KRTAP19-8Q3LI54 63 aa3.42□□□□□ -1.86
CTHRC1-203ENST00000520337 C10orf95Q9H7T3 257 aa3.4□□□□□ -1.87
CTHRC1-203ENST00000520337 MT1BP07438 61 aa3.38□□□□□ -1.87
CTHRC1-203ENST00000520337 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
CTHRC1-203ENST00000520337 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
CTHRC1-203ENST00000520337 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
CTHRC1-203ENST00000520337 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
CTHRC1-203ENST00000520337 CAMK2N1Q7Z7J9 78 aa3.27□□□□□ -1.89
CTHRC1-203ENST00000520337 USH2AO75445 5202 aa3.26□□□□□ -1.89
CTHRC1-203ENST00000520337 MT1XP80297 61 aa3.26□□□□□ -1.89
CTHRC1-203ENST00000520337 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
CTHRC1-203ENST00000520337 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
CTHRC1-203ENST00000520337 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
CTHRC1-203ENST00000520337 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
CTHRC1-203ENST00000520337 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
CTHRC1-203ENST00000520337 PRO2289Q9P1D8 64 aa3.17□□□□□ -1.9
CTHRC1-203ENST00000520337 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
CTHRC1-203ENST00000520337 TNP1P09430 55 aa3.14□□□□□ -1.91
CTHRC1-203ENST00000520337 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
CTHRC1-203ENST00000520337 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
CTHRC1-203ENST00000520337 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
CTHRC1-203ENST00000520337 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
CTHRC1-203ENST00000520337 KMT2DO14686 5537 aa2.94□□□□□ -1.94
CTHRC1-203ENST00000520337 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
CTHRC1-203ENST00000520337 MACF1Q9UPN3 7388 aaKnown RBP2.93□□□□□ -1.94
CTHRC1-203ENST00000520337 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
CTHRC1-203ENST00000520337 NEBP20929 6669 aa2.91□□□□□ -1.94
CTHRC1-203ENST00000520337 KRTAP19-7Q3SYF9 63 aa2.91□□□□□ -1.94
CTHRC1-203ENST00000520337 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
CTHRC1-203ENST00000520337 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
CTHRC1-203ENST00000520337 MT1EP04732 61 aa2.85□□□□□ -1.95
CTHRC1-203ENST00000520337 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
CTHRC1-203ENST00000520337 INE1O15225 51 aa2.84□□□□□ -1.95
CTHRC1-203ENST00000520337 SPRR2FQ96RM1 72 aa2.81□□□□□ -1.96
CTHRC1-203ENST00000520337 KRTAP6-3Q3LI67 103 aa2.79□□□□□ -1.96
CTHRC1-203ENST00000520337 MT1LQ93083 61 aa2.79□□□□□ -1.96
CTHRC1-203ENST00000520337 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
CTHRC1-203ENST00000520337 KRTAP19-3Q7Z4W3 81 aa2.74□□□□□ -1.97
CTHRC1-203ENST00000520337 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
CTHRC1-203ENST00000520337 MT1GP13640 62 aa2.71□□□□□ -1.98
CTHRC1-203ENST00000520337 MT1MQ8N339 61 aa2.69□□□□□ -1.98
CTHRC1-203ENST00000520337 SPRR2EP22531 72 aa2.68□□□□□ -1.98
CTHRC1-203ENST00000520337 SPRR2BP35325 72 aa2.68□□□□□ -1.98
CTHRC1-203ENST00000520337 SPRR2AP35326 72 aa2.68□□□□□ -1.98
CTHRC1-203ENST00000520337 KRTAP2-3P0C7H8 128 aa2.62□□□□□ -1.99
CTHRC1-203ENST00000520337 KRTAP2-4Q9BYR9 128 aa2.62□□□□□ -1.99
CTHRC1-203ENST00000520337 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
CTHRC1-203ENST00000520337 MDN1Q9NU22 5596 aa2.6□□□□□ -1.99
CTHRC1-203ENST00000520337 SPRR2DP22532 72 aa2.58□□□□□ -2
CTHRC1-203ENST00000520337 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
CTHRC1-203ENST00000520337 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
CTHRC1-203ENST00000520337 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
CTHRC1-203ENST00000520337 MT1AP04731 61 aa2.36□□□□□ -2.03
CTHRC1-203ENST00000520337 KRTAP6-1Q3LI64 71 aa2.35□□□□□ -2.03
CTHRC1-203ENST00000520337 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
CTHRC1-203ENST00000520337 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
CTHRC1-203ENST00000520337 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
CTHRC1-203ENST00000520337 MT4P47944 62 aa2.24□□□□□ -2.05
CTHRC1-203ENST00000520337 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
CTHRC1-203ENST00000520337 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
CTHRC1-203ENST00000520337 KRTAP20-2Q3LI61 65 aa2.19□□□□□ -2.06
CTHRC1-203ENST00000520337 KRTAP6-2Q3LI66 62 aa2.17□□□□□ -2.06
CTHRC1-203ENST00000520337 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
CTHRC1-203ENST00000520337 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
CTHRC1-203ENST00000520337 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
CTHRC1-203ENST00000520337 PRM1P04553 51 aa1.91□□□□□ -2.1
CTHRC1-203ENST00000520337 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
CTHRC1-203ENST00000520337 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
CTHRC1-203ENST00000520337 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 109.1 ms