RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 SPRR2GQ9BYE4 73 aa2.55□□□□□ -2
CTNNA1-220ENST00000520260 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
CTNNA1-220ENST00000520260 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
CTNNA1-220ENST00000520260 KRTAP19-8Q3LI54 63 aa2.49□□□□□ -2.01
CTNNA1-220ENST00000520260 KRTAP19-6Q3LI70 58 aa2.48□□□□□ -2.01
CTNNA1-220ENST00000520260 PP632Q6XCG6 107 aa2.46□□□□□ -2.02
CTNNA1-220ENST00000520260 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
CTNNA1-220ENST00000520260 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
CTNNA1-220ENST00000520260 USH2AO75445 5202 aa2.45□□□□□ -2.02
CTNNA1-220ENST00000520260 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
CTNNA1-220ENST00000520260 MT1BP07438 61 aa2.41□□□□□ -2.02
CTNNA1-220ENST00000520260 KRTAP10-5P60370 271 aa2.41□□□□□ -2.02
CTNNA1-220ENST00000520260 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
CTNNA1-220ENST00000520260 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
CTNNA1-220ENST00000520260 FCGBPQ9Y6R7 5405 aaPredicted RBP2.36□□□□□ -2.03
CTNNA1-220ENST00000520260 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
CTNNA1-220ENST00000520260 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.04
CTNNA1-220ENST00000520260 MT1XP80297 61 aa2.31□□□□□ -2.04
CTNNA1-220ENST00000520260 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
CTNNA1-220ENST00000520260 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
CTNNA1-220ENST00000520260 KRTAP9-6A8MVA2 160 aa2.29□□□□□ -2.04
CTNNA1-220ENST00000520260 TNP1P09430 55 aa2.29□□□□□ -2.04
CTNNA1-220ENST00000520260 KRTAP8-1Q8IUC2 63 aa2.28□□□□□ -2.04
CTNNA1-220ENST00000520260 KRTAP10-12P60413 245 aa2.25□□□□□ -2.05
CTNNA1-220ENST00000520260 SPRR2FQ96RM1 72 aa2.22□□□□□ -2.05
CTNNA1-220ENST00000520260 INE1O15225 51 aa2.21□□□□□ -2.06
CTNNA1-220ENST00000520260 NEBP20929 6669 aa2.19□□□□□ -2.06
CTNNA1-220ENST00000520260 SPRR2EP22531 72 aa2.17□□□□□ -2.06
CTNNA1-220ENST00000520260 SPRR2BP35325 72 aa2.17□□□□□ -2.06
CTNNA1-220ENST00000520260 SPRR2AP35326 72 aa2.17□□□□□ -2.06
CTNNA1-220ENST00000520260 KRTAP20-1Q3LI63 56 aa2.17□□□□□ -2.06
CTNNA1-220ENST00000520260 KMT2DO14686 5537 aa2.12□□□□□ -2.07
CTNNA1-220ENST00000520260 SPRR2DP22532 72 aa2.11□□□□□ -2.07
CTNNA1-220ENST00000520260 LCE3AQ5TA76 89 aa2.11□□□□□ -2.07
CTNNA1-220ENST00000520260 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
CTNNA1-220ENST00000520260 MT3P25713 68 aa2.1□□□□□ -2.07
CTNNA1-220ENST00000520260 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
CTNNA1-220ENST00000520260 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
CTNNA1-220ENST00000520260 KRTAP2-3P0C7H8 128 aa2.09□□□□□ -2.07
CTNNA1-220ENST00000520260 KRTAP2-4Q9BYR9 128 aa2.09□□□□□ -2.07
CTNNA1-220ENST00000520260 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
CTNNA1-220ENST00000520260 MT1EP04732 61 aa2.06□□□□□ -2.08
CTNNA1-220ENST00000520260 MT1GP13640 62 aa2.06□□□□□ -2.08
CTNNA1-220ENST00000520260 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
CTNNA1-220ENST00000520260 KRTAP19-3Q7Z4W3 81 aa2.06□□□□□ -2.08
CTNNA1-220ENST00000520260 KRTAP19-7Q3SYF9 63 aa2.04□□□□□ -2.08
CTNNA1-220ENST00000520260 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
CTNNA1-220ENST00000520260 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
CTNNA1-220ENST00000520260 MT1LQ93083 61 aa1.99□□□□□ -2.09
CTNNA1-220ENST00000520260 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
CTNNA1-220ENST00000520260 MT1MQ8N339 61 aa1.95□□□□□ -2.1
CTNNA1-220ENST00000520260 LCE3CQ5T5A8 94 aa1.93□□□□□ -2.1
CTNNA1-220ENST00000520260 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
CTNNA1-220ENST00000520260 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
CTNNA1-220ENST00000520260 MT4P47944 62 aa1.78□□□□□ -2.12
CTNNA1-220ENST00000520260 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.12
CTNNA1-220ENST00000520260 LCE3EQ5T5B0 92 aa1.77□□□□□ -2.13
CTNNA1-220ENST00000520260 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
CTNNA1-220ENST00000520260 MT1AP04731 61 aa1.73□□□□□ -2.13
CTNNA1-220ENST00000520260 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
CTNNA1-220ENST00000520260 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
CTNNA1-220ENST00000520260 KRTAP5-10Q6L8G5 202 aa1.7□□□□□ -2.14
CTNNA1-220ENST00000520260 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
CTNNA1-220ENST00000520260 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
CTNNA1-220ENST00000520260 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
CTNNA1-220ENST00000520260 KRTAP6-1Q3LI64 71 aa1.64□□□□□ -2.15
CTNNA1-220ENST00000520260 SYNE1Q8NF91 8797 aaKnown RBP1.6□□□□□ -2.15
CTNNA1-220ENST00000520260 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
CTNNA1-220ENST00000520260 KRTAP6-2Q3LI66 62 aa1.58□□□□□ -2.16
CTNNA1-220ENST00000520260 LCE3DQ9BYE3 92 aa1.49□□□□□ -2.17
CTNNA1-220ENST00000520260 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
CTNNA1-220ENST00000520260 PRM1P04553 51 aa1.47□□□□□ -2.17
CTNNA1-220ENST00000520260 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
CTNNA1-220ENST00000520260 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
CTNNA1-220ENST00000520260 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
CTNNA1-220ENST00000520260 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
CTNNA1-220ENST00000520260 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
CTNNA1-220ENST00000520260 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 46.1 ms