RNA–Protein interactions for RNA: ENST00000520022.2

ARFGAP1-213, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 4

Gene ARFGAP1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-213ENST00000520022 LCE4AQ5TA78 99 aa6.11□□□□□ -1.43
ARFGAP1-213ENST00000520022 PRR15LQ9BU68 103 aa6.09□□□□□ -1.43
ARFGAP1-213ENST00000520022 TMEM258P61165 79 aa6.06□□□□□ -1.44
ARFGAP1-213ENST00000520022 HMCN1Q96RW7 5635 aa6.03□□□□□ -1.44
ARFGAP1-213ENST00000520022 ATP5EP56381 51 aaPredicted RBP6.03□□□□□ -1.44
ARFGAP1-213ENST00000520022 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.45
ARFGAP1-213ENST00000520022 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
ARFGAP1-213ENST00000520022 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
ARFGAP1-213ENST00000520022 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
ARFGAP1-213ENST00000520022 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
ARFGAP1-213ENST00000520022 UQCR11O14957 56 aa5.89□□□□□ -1.47
ARFGAP1-213ENST00000520022 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
ARFGAP1-213ENST00000520022 MIR22HGQ0VDD5 57 aa5.77□□□□□ -1.49
ARFGAP1-213ENST00000520022 KRTAP5-10Q6L8G5 202 aa5.77□□□□□ -1.49
ARFGAP1-213ENST00000520022 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
ARFGAP1-213ENST00000520022 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
ARFGAP1-213ENST00000520022 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
ARFGAP1-213ENST00000520022 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
ARFGAP1-213ENST00000520022 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
ARFGAP1-213ENST00000520022 K7ERS5 55 aa5.66□□□□□ -1.5
ARFGAP1-213ENST00000520022 Q1T7F1 81 aa5.65□□□□□ -1.5
ARFGAP1-213ENST00000520022 KRTAP5-3Q6L8H2 238 aa5.63□□□□□ -1.51
ARFGAP1-213ENST00000520022 SVIPQ8NHG7 77 aa5.63□□□□□ -1.51
ARFGAP1-213ENST00000520022 PSPHP1O15172 72 aa5.62□□□□□ -1.51
ARFGAP1-213ENST00000520022 V9GYY9 64 aa5.62□□□□□ -1.51
ARFGAP1-213ENST00000520022 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
ARFGAP1-213ENST00000520022 KRTAP12-4P60329 112 aa5.59□□□□□ -1.51
ARFGAP1-213ENST00000520022 KRTAP5-7Q6L8G8 165 aa5.55□□□□□ -1.52
ARFGAP1-213ENST00000520022 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
ARFGAP1-213ENST00000520022 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
ARFGAP1-213ENST00000520022 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
ARFGAP1-213ENST00000520022 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
ARFGAP1-213ENST00000520022 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
ARFGAP1-213ENST00000520022 A6NED7 52 aa5.41□□□□□ -1.54
ARFGAP1-213ENST00000520022 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
ARFGAP1-213ENST00000520022 MT1AP04731 61 aa5.29□□□□□ -1.56
ARFGAP1-213ENST00000520022 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
ARFGAP1-213ENST00000520022 ROMO1P60602 79 aa5.27□□□□□ -1.57
ARFGAP1-213ENST00000520022 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
ARFGAP1-213ENST00000520022 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
ARFGAP1-213ENST00000520022 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
ARFGAP1-213ENST00000520022 BRK1Q8WUW1 75 aa5.15□□□□□ -1.59
ARFGAP1-213ENST00000520022 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
ARFGAP1-213ENST00000520022 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
ARFGAP1-213ENST00000520022 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
ARFGAP1-213ENST00000520022 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
ARFGAP1-213ENST00000520022 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
ARFGAP1-213ENST00000520022 PRO0628Q9UI54 55 aa4.85□□□□□ -1.63
ARFGAP1-213ENST00000520022 MT3P25713 68 aa4.84□□□□□ -1.63
ARFGAP1-213ENST00000520022 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
ARFGAP1-213ENST00000520022 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
ARFGAP1-213ENST00000520022 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
ARFGAP1-213ENST00000520022 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
ARFGAP1-213ENST00000520022 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
ARFGAP1-213ENST00000520022 PRAC1Q96KF2 57 aa4.64□□□□□ -1.67
ARFGAP1-213ENST00000520022 KTN1-AS1Q86SY8 53 aa4.53□□□□□ -1.68
ARFGAP1-213ENST00000520022 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
ARFGAP1-213ENST00000520022 LCE1BQ5T7P3 118 aa4.27□□□□□ -1.73
ARFGAP1-213ENST00000520022 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
ARFGAP1-213ENST00000520022 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
ARFGAP1-213ENST00000520022 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
ARFGAP1-213ENST00000520022 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
ARFGAP1-213ENST00000520022 H3BS24 57 aa3.9□□□□□ -1.79
ARFGAP1-213ENST00000520022 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
ARFGAP1-213ENST00000520022 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
ARFGAP1-213ENST00000520022 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
ARFGAP1-213ENST00000520022 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
ARFGAP1-213ENST00000520022 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
ARFGAP1-213ENST00000520022 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
ARFGAP1-213ENST00000520022 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
ARFGAP1-213ENST00000520022 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
ARFGAP1-213ENST00000520022 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
ARFGAP1-213ENST00000520022 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
ARFGAP1-213ENST00000520022 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
ARFGAP1-213ENST00000520022 INE1O15225 51 aa3.01□□□□□ -1.93
ARFGAP1-213ENST00000520022 PRM1P04553 51 aa2.7□□□□□ -1.98
ARFGAP1-213ENST00000520022 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
ARFGAP1-213ENST00000520022 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 91.3 ms