RNA–Protein interactions for RNA: ENST00000519885.5

TRAPPC2-208, Transcript of trafficking protein particle complex 2, humanhuman

TSL 3 BASIC

Gene TRAPPC2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-208ENST00000519885 KTN1-AS1Q86SY8 53 aa2.2□□□□□ -2.06
TRAPPC2-208ENST00000519885 LCE3AQ5TA76 89 aa2.19□□□□□ -2.06
TRAPPC2-208ENST00000519885 PLAC4Q8WY50 150 aa2.19□□□□□ -2.06
TRAPPC2-208ENST00000519885 MT2AP02795 61 aa2.18□□□□□ -2.06
TRAPPC2-208ENST00000519885 LINC01554Q52M75 96 aa2.18□□□□□ -2.06
TRAPPC2-208ENST00000519885 PRO2289Q9P1D8 64 aa2.18□□□□□ -2.06
TRAPPC2-208ENST00000519885 A0A0D9SG42 100 aa2.17□□□□□ -2.06
TRAPPC2-208ENST00000519885 MT1FP04733 61 aa2.16□□□□□ -2.06
TRAPPC2-208ENST00000519885 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
TRAPPC2-208ENST00000519885 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
TRAPPC2-208ENST00000519885 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
TRAPPC2-208ENST00000519885 ROMO1P60602 79 aa2.1□□□□□ -2.07
TRAPPC2-208ENST00000519885 TNP1P09430 55 aa2.08□□□□□ -2.08
TRAPPC2-208ENST00000519885 PP632Q6XCG6 107 aa2.08□□□□□ -2.08
TRAPPC2-208ENST00000519885 FAT4Q6V0I7 4981 aa2.07□□□□□ -2.08
TRAPPC2-208ENST00000519885 MT1BP07438 61 aa2.03□□□□□ -2.08
TRAPPC2-208ENST00000519885 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
TRAPPC2-208ENST00000519885 KRTAP19-6Q3LI70 58 aa2□□□□□ -2.09
TRAPPC2-208ENST00000519885 C10orf95Q9H7T3 257 aa1.99□□□□□ -2.09
TRAPPC2-208ENST00000519885 MT1XP80297 61 aa1.98□□□□□ -2.09
TRAPPC2-208ENST00000519885 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC2-208ENST00000519885 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
TRAPPC2-208ENST00000519885 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
TRAPPC2-208ENST00000519885 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
TRAPPC2-208ENST00000519885 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
TRAPPC2-208ENST00000519885 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
TRAPPC2-208ENST00000519885 USH2AO75445 5202 aa1.86□□□□□ -2.11
TRAPPC2-208ENST00000519885 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
TRAPPC2-208ENST00000519885 KRTAP6-3Q3LI67 103 aa1.82□□□□□ -2.12
TRAPPC2-208ENST00000519885 SSPOA2VEC9 5147 aa1.8□□□□□ -2.12
TRAPPC2-208ENST00000519885 FCGBPQ9Y6R7 5405 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC2-208ENST00000519885 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
TRAPPC2-208ENST00000519885 FSIP2Q5CZC0 6907 aa1.76□□□□□ -2.13
TRAPPC2-208ENST00000519885 MT1EP04732 61 aa1.76□□□□□ -2.13
TRAPPC2-208ENST00000519885 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
TRAPPC2-208ENST00000519885 SPRR2FQ96RM1 72 aa1.76□□□□□ -2.13
TRAPPC2-208ENST00000519885 MT1GP13640 62 aa1.73□□□□□ -2.13
TRAPPC2-208ENST00000519885 KRTAP19-3Q7Z4W3 81 aa1.73□□□□□ -2.13
TRAPPC2-208ENST00000519885 MT1LQ93083 61 aa1.72□□□□□ -2.13
TRAPPC2-208ENST00000519885 MACF1Q9UPN3 7388 aaKnown RBP1.71□□□□□ -2.14
TRAPPC2-208ENST00000519885 INE1O15225 51 aa1.7□□□□□ -2.14
TRAPPC2-208ENST00000519885 SPRR2EP22531 72 aa1.69□□□□□ -2.14
TRAPPC2-208ENST00000519885 SPRR2BP35325 72 aa1.69□□□□□ -2.14
TRAPPC2-208ENST00000519885 SPRR2AP35326 72 aa1.69□□□□□ -2.14
TRAPPC2-208ENST00000519885 KMT2DO14686 5537 aa1.69□□□□□ -2.14
TRAPPC2-208ENST00000519885 MT1MQ8N339 61 aa1.65□□□□□ -2.15
TRAPPC2-208ENST00000519885 SPRR2DP22532 72 aa1.64□□□□□ -2.15
TRAPPC2-208ENST00000519885 KRTAP20-1Q3LI63 56 aa1.62□□□□□ -2.15
TRAPPC2-208ENST00000519885 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
TRAPPC2-208ENST00000519885 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
TRAPPC2-208ENST00000519885 SYNE2Q8WXH0 6885 aaKnown RBP1.57□□□□□ -2.16
TRAPPC2-208ENST00000519885 KRTAP12-4P60329 112 aa1.57□□□□□ -2.16
TRAPPC2-208ENST00000519885 MUC12Q9UKN1 5478 aa1.57□□□□□ -2.16
TRAPPC2-208ENST00000519885 KRTAP2-3P0C7H8 128 aa1.56□□□□□ -2.16
TRAPPC2-208ENST00000519885 KRTAP2-4Q9BYR9 128 aa1.56□□□□□ -2.16
TRAPPC2-208ENST00000519885 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
TRAPPC2-208ENST00000519885 NEBP20929 6669 aa1.55□□□□□ -2.16
TRAPPC2-208ENST00000519885 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
TRAPPC2-208ENST00000519885 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
TRAPPC2-208ENST00000519885 MT1AP04731 61 aa1.5□□□□□ -2.17
TRAPPC2-208ENST00000519885 DSTQ03001 7570 aaKnown RBP1.49□□□□□ -2.17
TRAPPC2-208ENST00000519885 KRTAP6-1Q3LI64 71 aa1.4□□□□□ -2.19
TRAPPC2-208ENST00000519885 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
TRAPPC2-208ENST00000519885 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
TRAPPC2-208ENST00000519885 MT4P47944 62 aa1.36□□□□□ -2.19
TRAPPC2-208ENST00000519885 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
TRAPPC2-208ENST00000519885 KRTAP6-2Q3LI66 62 aa1.31□□□□□ -2.2
TRAPPC2-208ENST00000519885 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.21
TRAPPC2-208ENST00000519885 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
TRAPPC2-208ENST00000519885 HMCN1Q96RW7 5635 aa1.26□□□□□ -2.21
TRAPPC2-208ENST00000519885 KRTAP5-10Q6L8G5 202 aa1.25□□□□□ -2.21
TRAPPC2-208ENST00000519885 SYNE1Q8NF91 8797 aaKnown RBP1.23□□□□□ -2.21
TRAPPC2-208ENST00000519885 MUC5ACP98088 5654 aa1.15□□□□□ -2.23
TRAPPC2-208ENST00000519885 PRM1P04553 51 aa1.04□□□□□ -2.24
TRAPPC2-208ENST00000519885 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
TRAPPC2-208ENST00000519885 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
TRAPPC2-208ENST00000519885 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms