RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

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Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 MT2AP02795 61 aa1.36□□□□□ -2.19
EFR3A-202ENST00000519656 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
EFR3A-202ENST00000519656 LINC00472Q9H8W2 130 aa1.36□□□□□ -2.19
EFR3A-202ENST00000519656 SPRR2FQ96RM1 72 aa1.35□□□□□ -2.19
EFR3A-202ENST00000519656 KRTAP19-6Q3LI70 58 aa1.35□□□□□ -2.19
EFR3A-202ENST00000519656 KRTAP4-1Q9BYQ7 146 aa1.35□□□□□ -2.19
EFR3A-202ENST00000519656 CYSTM1Q9H1C7 97 aa1.35□□□□□ -2.19
EFR3A-202ENST00000519656 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
EFR3A-202ENST00000519656 KRTAP15-1Q3LI76 137 aa1.34□□□□□ -2.19
EFR3A-202ENST00000519656 FSIP2Q5CZC0 6907 aa1.33□□□□□ -2.2
EFR3A-202ENST00000519656 LOC110117498A0A087WWA1 95 aa1.33□□□□□ -2.2
EFR3A-202ENST00000519656 KRTAP5-5Q701N2 237 aaPredicted RBP1.32□□□□□ -2.2
EFR3A-202ENST00000519656 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
EFR3A-202ENST00000519656 MT1FP04733 61 aa1.3□□□□□ -2.2
EFR3A-202ENST00000519656 MT3P25713 68 aa1.3□□□□□ -2.2
EFR3A-202ENST00000519656 LINC01558Q9Y6Z2 57 aa1.28□□□□□ -2.2
EFR3A-202ENST00000519656 H0YAA0 97 aa1.27□□□□□ -2.21
EFR3A-202ENST00000519656 KRTAP13-4Q3LI77 160 aa1.27□□□□□ -2.21
EFR3A-202ENST00000519656 LCE1AQ5T7P2 110 aa1.27□□□□□ -2.21
EFR3A-202ENST00000519656 KRTAP10-5P60370 271 aa1.26□□□□□ -2.21
EFR3A-202ENST00000519656 KRTAP10-12P60413 245 aa1.25□□□□□ -2.21
EFR3A-202ENST00000519656 USH2AO75445 5202 aa1.24□□□□□ -2.21
EFR3A-202ENST00000519656 KRTAP19-2Q3LHN2 52 aa1.23□□□□□ -2.21
EFR3A-202ENST00000519656 LCE1EQ5T753 118 aa1.23□□□□□ -2.21
EFR3A-202ENST00000519656 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
EFR3A-202ENST00000519656 KRTAP12-4P60329 112 aa1.22□□□□□ -2.21
EFR3A-202ENST00000519656 KRTAP19-8Q3LI54 63 aa1.22□□□□□ -2.21
EFR3A-202ENST00000519656 SPRR2GQ9BYE4 73 aa1.22□□□□□ -2.21
EFR3A-202ENST00000519656 KRTAP12-2P59991 146 aa1.21□□□□□ -2.22
EFR3A-202ENST00000519656 KMT2DO14686 5537 aa1.2□□□□□ -2.22
EFR3A-202ENST00000519656 LPAP08519 4548 aa1.2□□□□□ -2.22
EFR3A-202ENST00000519656 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
EFR3A-202ENST00000519656 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
EFR3A-202ENST00000519656 KRTAP5-8O75690 187 aa1.17□□□□□ -2.22
EFR3A-202ENST00000519656 MT4P47944 62 aa1.15□□□□□ -2.23
EFR3A-202ENST00000519656 KRTAP5-4Q6L8H1 288 aa1.15□□□□□ -2.23
EFR3A-202ENST00000519656 DSTQ03001 7570 aaKnown RBP1.14□□□□□ -2.23
EFR3A-202ENST00000519656 MT1BP07438 61 aa1.14□□□□□ -2.23
EFR3A-202ENST00000519656 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
EFR3A-202ENST00000519656 LCE1FQ5T754 118 aa1.14□□□□□ -2.23
EFR3A-202ENST00000519656 MT1GP13640 62 aa1.13□□□□□ -2.23
EFR3A-202ENST00000519656 INE1O15225 51 aa1.13□□□□□ -2.23
EFR3A-202ENST00000519656 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
EFR3A-202ENST00000519656 KRTAP12-3P60328 96 aa1.13□□□□□ -2.23
EFR3A-202ENST00000519656 KRTAP12-1P59990 96 aa1.12□□□□□ -2.23
EFR3A-202ENST00000519656 MDN1Q9NU22 5596 aa1.11□□□□□ -2.23
EFR3A-202ENST00000519656 KRTAP19-3Q7Z4W3 81 aa1.09□□□□□ -2.24
EFR3A-202ENST00000519656 LCE3EQ5T5B0 92 aa1.08□□□□□ -2.24
EFR3A-202ENST00000519656 KRTAP5-11Q6L8G4 156 aa1.08□□□□□ -2.24
EFR3A-202ENST00000519656 KRTAP5-10Q6L8G5 202 aa1.08□□□□□ -2.24
EFR3A-202ENST00000519656 LCE3CQ5T5A8 94 aa1.07□□□□□ -2.24
EFR3A-202ENST00000519656 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
EFR3A-202ENST00000519656 MT1XP80297 61 aa1.05□□□□□ -2.24
EFR3A-202ENST00000519656 LCE3DQ9BYE3 92 aa1.03□□□□□ -2.24
EFR3A-202ENST00000519656 LCE1CQ5T751 118 aa1□□□□□ -2.25
EFR3A-202ENST00000519656 MT1EP04732 61 aa0.99□□□□□ -2.25
EFR3A-202ENST00000519656 KRTAP19-5Q3LI72 72 aa0.98□□□□□ -2.25
EFR3A-202ENST00000519656 MT1MQ8N339 61 aa0.98□□□□□ -2.25
EFR3A-202ENST00000519656 KRTAP4-4Q9BYR3 166 aa0.97□□□□□ -2.25
EFR3A-202ENST00000519656 KRTAP9-6A8MVA2 160 aa0.97□□□□□ -2.25
EFR3A-202ENST00000519656 MUC12Q9UKN1 5478 aa0.96□□□□□ -2.26
EFR3A-202ENST00000519656 LCE3AQ5TA76 89 aa0.95□□□□□ -2.26
EFR3A-202ENST00000519656 LCE1BQ5T7P3 118 aa0.94□□□□□ -2.26
EFR3A-202ENST00000519656 MT1LQ93083 61 aa0.94□□□□□ -2.26
EFR3A-202ENST00000519656 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
EFR3A-202ENST00000519656 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
EFR3A-202ENST00000519656 KRTAP20-2Q3LI61 65 aa0.92□□□□□ -2.26
EFR3A-202ENST00000519656 KRTAP19-7Q3SYF9 63 aa0.91□□□□□ -2.26
EFR3A-202ENST00000519656 MT1AP04731 61 aa0.89□□□□□ -2.27
EFR3A-202ENST00000519656 KRTAP4-3Q9BYR4 195 aa0.84□□□□□ -2.27
EFR3A-202ENST00000519656 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
EFR3A-202ENST00000519656 KRTAP6-2Q3LI66 62 aa0.8□□□□□ -2.28
EFR3A-202ENST00000519656 KRTAP6-1Q3LI64 71 aa0.74□□□□□ -2.29
EFR3A-202ENST00000519656 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
EFR3A-202ENST00000519656 PRM1P04553 51 aa0.67□□□□□ -2.3
EFR3A-202ENST00000519656 KRTAP21-2Q3LI59 83 aa0.62□□□□□ -2.31
EFR3A-202ENST00000519656 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 156 ms