RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TNP1P09430 55 aa4.29□□□□□ -1.72
CSMD1-205ENST00000519623 ANAPC13Q9BS18 74 aa4.28□□□□□ -1.72
CSMD1-205ENST00000519623 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
CSMD1-205ENST00000519623 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
CSMD1-205ENST00000519623 CCDC179H3BU77 68 aa4.21□□□□□ -1.74
CSMD1-205ENST00000519623 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
CSMD1-205ENST00000519623 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
CSMD1-205ENST00000519623 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
CSMD1-205ENST00000519623 PRR15LQ9BU68 103 aa4.13□□□□□ -1.75
CSMD1-205ENST00000519623 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
CSMD1-205ENST00000519623 TMEM258P61165 79 aa4.1□□□□□ -1.75
CSMD1-205ENST00000519623 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
CSMD1-205ENST00000519623 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
CSMD1-205ENST00000519623 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
CSMD1-205ENST00000519623 ATP5EP56381 51 aaPredicted RBP4.06□□□□□ -1.76
CSMD1-205ENST00000519623 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
CSMD1-205ENST00000519623 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
CSMD1-205ENST00000519623 UQCR11O14957 56 aa4.02□□□□□ -1.77
CSMD1-205ENST00000519623 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
CSMD1-205ENST00000519623 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
CSMD1-205ENST00000519623 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
CSMD1-205ENST00000519623 RPS28P62857 69 aaKnown RBP3.99□□□□□ -1.77
CSMD1-205ENST00000519623 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
CSMD1-205ENST00000519623 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
CSMD1-205ENST00000519623 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
CSMD1-205ENST00000519623 MIR22HGQ0VDD5 57 aa3.91□□□□□ -1.78
CSMD1-205ENST00000519623 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
CSMD1-205ENST00000519623 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
CSMD1-205ENST00000519623 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
CSMD1-205ENST00000519623 K7ERS5 55 aa3.83□□□□□ -1.8
CSMD1-205ENST00000519623 Q1T7F1 81 aa3.8□□□□□ -1.8
CSMD1-205ENST00000519623 PSPHP1O15172 72 aa3.76□□□□□ -1.81
CSMD1-205ENST00000519623 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
CSMD1-205ENST00000519623 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
CSMD1-205ENST00000519623 V9GYY9 64 aa3.76□□□□□ -1.81
CSMD1-205ENST00000519623 MT1AP04731 61 aa3.75□□□□□ -1.81
CSMD1-205ENST00000519623 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
CSMD1-205ENST00000519623 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
CSMD1-205ENST00000519623 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
CSMD1-205ENST00000519623 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
CSMD1-205ENST00000519623 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
CSMD1-205ENST00000519623 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
CSMD1-205ENST00000519623 A6NED7 52 aa3.6□□□□□ -1.83
CSMD1-205ENST00000519623 ROMO1P60602 79 aa3.58□□□□□ -1.84
CSMD1-205ENST00000519623 H3BS24 57 aa3.54□□□□□ -1.84
CSMD1-205ENST00000519623 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
CSMD1-205ENST00000519623 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
CSMD1-205ENST00000519623 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
CSMD1-205ENST00000519623 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
CSMD1-205ENST00000519623 MUC5BQ9HC84 5762 aaPredicted RBP3.49□□□□□ -1.85
CSMD1-205ENST00000519623 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
CSMD1-205ENST00000519623 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
CSMD1-205ENST00000519623 MT3P25713 68 aa3.44□□□□□ -1.86
CSMD1-205ENST00000519623 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
CSMD1-205ENST00000519623 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
CSMD1-205ENST00000519623 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
CSMD1-205ENST00000519623 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
CSMD1-205ENST00000519623 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
CSMD1-205ENST00000519623 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
CSMD1-205ENST00000519623 A0A0A0MQY5 61 aa3.02□□□□□ -1.93
CSMD1-205ENST00000519623 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
CSMD1-205ENST00000519623 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
CSMD1-205ENST00000519623 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
CSMD1-205ENST00000519623 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
CSMD1-205ENST00000519623 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
CSMD1-205ENST00000519623 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
CSMD1-205ENST00000519623 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
CSMD1-205ENST00000519623 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
CSMD1-205ENST00000519623 LUZP6Q538Z0 58 aa2.5□□□□□ -2.01
CSMD1-205ENST00000519623 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
CSMD1-205ENST00000519623 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
CSMD1-205ENST00000519623 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
CSMD1-205ENST00000519623 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
CSMD1-205ENST00000519623 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
CSMD1-205ENST00000519623 INE1O15225 51 aa2.11□□□□□ -2.07
CSMD1-205ENST00000519623 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
CSMD1-205ENST00000519623 PRM1P04553 51 aa1.82□□□□□ -2.12
CSMD1-205ENST00000519623 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 95.2 ms