RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 MT1MQ8N339 61 aa3.87□□□□□ -1.79
PVT1-208ENST00000519481 COX7CP15954 63 aa3.86□□□□□ -1.79
PVT1-208ENST00000519481 MT4P47944 62 aa3.86□□□□□ -1.79
PVT1-208ENST00000519481 A0A1B0GU69 56 aa3.85□□□□□ -1.79
PVT1-208ENST00000519481 MT1LQ93083 61 aa3.85□□□□□ -1.79
PVT1-208ENST00000519481 TNP1P09430 55 aa3.83□□□□□ -1.8
PVT1-208ENST00000519481 SVIPQ8NHG7 77 aa3.83□□□□□ -1.8
PVT1-208ENST00000519481 H7BZZ5 65 aa3.81□□□□□ -1.8
PVT1-208ENST00000519481 C10orf95Q9H7T3 257 aa3.81□□□□□ -1.8
PVT1-208ENST00000519481 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
PVT1-208ENST00000519481 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
PVT1-208ENST00000519481 A8MU10 97 aa3.79□□□□□ -1.8
PVT1-208ENST00000519481 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
PVT1-208ENST00000519481 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
PVT1-208ENST00000519481 PCP4P48539 62 aa3.72□□□□□ -1.81
PVT1-208ENST00000519481 PRR15LQ9BU68 103 aa3.72□□□□□ -1.81
PVT1-208ENST00000519481 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
PVT1-208ENST00000519481 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
PVT1-208ENST00000519481 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
PVT1-208ENST00000519481 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
PVT1-208ENST00000519481 ANAPC13Q9BS18 74 aa3.65□□□□□ -1.83
PVT1-208ENST00000519481 ATP5EP56381 51 aaPredicted RBP3.62□□□□□ -1.83
PVT1-208ENST00000519481 LINC01558Q9Y6Z2 57 aa3.59□□□□□ -1.83
PVT1-208ENST00000519481 UQCR11O14957 56 aa3.57□□□□□ -1.84
PVT1-208ENST00000519481 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
PVT1-208ENST00000519481 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
PVT1-208ENST00000519481 MT3P25713 68 aa3.56□□□□□ -1.84
PVT1-208ENST00000519481 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
PVT1-208ENST00000519481 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
PVT1-208ENST00000519481 CCDC179H3BU77 68 aa3.55□□□□□ -1.84
PVT1-208ENST00000519481 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
PVT1-208ENST00000519481 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
PVT1-208ENST00000519481 K7ERS5 55 aa3.5□□□□□ -1.85
PVT1-208ENST00000519481 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
PVT1-208ENST00000519481 TMEM258P61165 79 aa3.44□□□□□ -1.86
PVT1-208ENST00000519481 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
PVT1-208ENST00000519481 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
PVT1-208ENST00000519481 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
PVT1-208ENST00000519481 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
PVT1-208ENST00000519481 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
PVT1-208ENST00000519481 V9GYY9 64 aa3.33□□□□□ -1.88
PVT1-208ENST00000519481 PSPHP1O15172 72 aa3.3□□□□□ -1.88
PVT1-208ENST00000519481 MT1AP04731 61 aa3.29□□□□□ -1.88
PVT1-208ENST00000519481 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
PVT1-208ENST00000519481 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
PVT1-208ENST00000519481 Q1T7F1 81 aa3.25□□□□□ -1.89
PVT1-208ENST00000519481 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
PVT1-208ENST00000519481 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
PVT1-208ENST00000519481 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
PVT1-208ENST00000519481 A6NED7 52 aa3.21□□□□□ -1.9
PVT1-208ENST00000519481 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
PVT1-208ENST00000519481 ROMO1P60602 79 aa3.17□□□□□ -1.9
PVT1-208ENST00000519481 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
PVT1-208ENST00000519481 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
PVT1-208ENST00000519481 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
PVT1-208ENST00000519481 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.92
PVT1-208ENST00000519481 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
PVT1-208ENST00000519481 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
PVT1-208ENST00000519481 PRAC1Q96KF2 57 aa3.01□□□□□ -1.93
PVT1-208ENST00000519481 NDUFAF8A1L188 74 aa3□□□□□ -1.93
PVT1-208ENST00000519481 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
PVT1-208ENST00000519481 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
PVT1-208ENST00000519481 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
PVT1-208ENST00000519481 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
PVT1-208ENST00000519481 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
PVT1-208ENST00000519481 PMAIP1Q13794 54 aa2.68□□□□□ -1.98
PVT1-208ENST00000519481 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
PVT1-208ENST00000519481 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
PVT1-208ENST00000519481 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
PVT1-208ENST00000519481 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
PVT1-208ENST00000519481 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
PVT1-208ENST00000519481 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
PVT1-208ENST00000519481 LUZP6Q538Z0 58 aa2.11□□□□□ -2.07
PVT1-208ENST00000519481 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
PVT1-208ENST00000519481 INE1O15225 51 aa1.73□□□□□ -2.13
PVT1-208ENST00000519481 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
PVT1-208ENST00000519481 PRM1P04553 51 aa1.6□□□□□ -2.15
PVT1-208ENST00000519481 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms