RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
SPIDR-211ENST00000519401 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
SPIDR-211ENST00000519401 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
SPIDR-211ENST00000519401 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
SPIDR-211ENST00000519401 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
SPIDR-211ENST00000519401 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
SPIDR-211ENST00000519401 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
SPIDR-211ENST00000519401 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
SPIDR-211ENST00000519401 MT1BP07438 61 aa4.19□□□□□ -1.74
SPIDR-211ENST00000519401 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
SPIDR-211ENST00000519401 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
SPIDR-211ENST00000519401 MT1XP80297 61 aa4.12□□□□□ -1.75
SPIDR-211ENST00000519401 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
SPIDR-211ENST00000519401 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
SPIDR-211ENST00000519401 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
SPIDR-211ENST00000519401 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
SPIDR-211ENST00000519401 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
SPIDR-211ENST00000519401 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
SPIDR-211ENST00000519401 NEBP20929 6669 aa3.97□□□□□ -1.77
SPIDR-211ENST00000519401 KRTAP19-5Q3LI72 72 aa3.93□□□□□ -1.78
SPIDR-211ENST00000519401 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
SPIDR-211ENST00000519401 KMT2DO14686 5537 aa3.9□□□□□ -1.79
SPIDR-211ENST00000519401 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
SPIDR-211ENST00000519401 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
SPIDR-211ENST00000519401 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
SPIDR-211ENST00000519401 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
SPIDR-211ENST00000519401 SPRR2FQ96RM1 72 aa3.74□□□□□ -1.81
SPIDR-211ENST00000519401 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
SPIDR-211ENST00000519401 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
SPIDR-211ENST00000519401 SPRR2EP22531 72 aa3.67□□□□□ -1.82
SPIDR-211ENST00000519401 SPRR2BP35325 72 aa3.67□□□□□ -1.82
SPIDR-211ENST00000519401 SPRR2AP35326 72 aa3.67□□□□□ -1.82
SPIDR-211ENST00000519401 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
SPIDR-211ENST00000519401 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
SPIDR-211ENST00000519401 MT1LQ93083 61 aa3.59□□□□□ -1.83
SPIDR-211ENST00000519401 MT1EP04732 61 aa3.58□□□□□ -1.84
SPIDR-211ENST00000519401 SPRR2DP22532 72 aa3.55□□□□□ -1.84
SPIDR-211ENST00000519401 MT1AP04731 61 aa3.47□□□□□ -1.85
SPIDR-211ENST00000519401 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
SPIDR-211ENST00000519401 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
SPIDR-211ENST00000519401 PRM1P04553 51 aa3.42□□□□□ -1.86
SPIDR-211ENST00000519401 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
SPIDR-211ENST00000519401 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
SPIDR-211ENST00000519401 MT1GP13640 62 aa3.34□□□□□ -1.88
SPIDR-211ENST00000519401 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
SPIDR-211ENST00000519401 MT1MQ8N339 61 aa3.32□□□□□ -1.88
SPIDR-211ENST00000519401 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
SPIDR-211ENST00000519401 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
SPIDR-211ENST00000519401 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
SPIDR-211ENST00000519401 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
SPIDR-211ENST00000519401 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.9
SPIDR-211ENST00000519401 LCE1EQ5T753 118 aa3.15□□□□□ -1.9
SPIDR-211ENST00000519401 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
SPIDR-211ENST00000519401 MT4P47944 62 aa3.11□□□□□ -1.91
SPIDR-211ENST00000519401 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
SPIDR-211ENST00000519401 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
SPIDR-211ENST00000519401 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
SPIDR-211ENST00000519401 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
SPIDR-211ENST00000519401 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
SPIDR-211ENST00000519401 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
SPIDR-211ENST00000519401 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
SPIDR-211ENST00000519401 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
SPIDR-211ENST00000519401 MT3P25713 68 aa2.69□□□□□ -1.98
SPIDR-211ENST00000519401 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
SPIDR-211ENST00000519401 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
SPIDR-211ENST00000519401 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
SPIDR-211ENST00000519401 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
SPIDR-211ENST00000519401 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
SPIDR-211ENST00000519401 KRTAP5-8O75690 187 aa2.55□□□□□ -2
SPIDR-211ENST00000519401 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
SPIDR-211ENST00000519401 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
SPIDR-211ENST00000519401 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
SPIDR-211ENST00000519401 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
SPIDR-211ENST00000519401 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
SPIDR-211ENST00000519401 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
SPIDR-211ENST00000519401 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
SPIDR-211ENST00000519401 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SPIDR-211ENST00000519401 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 34.3 ms