RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 MT1LQ93083 61 aa5.34□□□□□ -1.55
PABPC1-210ENST00000519363 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
PABPC1-210ENST00000519363 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
PABPC1-210ENST00000519363 KRTAP19-3Q7Z4W3 81 aa5.28□□□□□ -1.56
PABPC1-210ENST00000519363 MT1GP13640 62 aa5.22□□□□□ -1.57
PABPC1-210ENST00000519363 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
PABPC1-210ENST00000519363 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
PABPC1-210ENST00000519363 LCE5AQ5TCM9 118 aa5.2□□□□□ -1.58
PABPC1-210ENST00000519363 SPRR2EP22531 72 aa5.16□□□□□ -1.58
PABPC1-210ENST00000519363 SPRR2BP35325 72 aa5.16□□□□□ -1.58
PABPC1-210ENST00000519363 SPRR2AP35326 72 aa5.16□□□□□ -1.58
PABPC1-210ENST00000519363 MT1MQ8N339 61 aa5.16□□□□□ -1.58
PABPC1-210ENST00000519363 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
PABPC1-210ENST00000519363 NEBP20929 6669 aa5.08□□□□□ -1.6
PABPC1-210ENST00000519363 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
PABPC1-210ENST00000519363 SPRR2DP22532 72 aa4.99□□□□□ -1.61
PABPC1-210ENST00000519363 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
PABPC1-210ENST00000519363 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
PABPC1-210ENST00000519363 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
PABPC1-210ENST00000519363 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
PABPC1-210ENST00000519363 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
PABPC1-210ENST00000519363 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
PABPC1-210ENST00000519363 KRTAP20-1Q3LI63 56 aa4.76□□□□□ -1.65
PABPC1-210ENST00000519363 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
PABPC1-210ENST00000519363 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
PABPC1-210ENST00000519363 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
PABPC1-210ENST00000519363 NDUFAF8A1L188 74 aa4.62□□□□□ -1.67
PABPC1-210ENST00000519363 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
PABPC1-210ENST00000519363 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
PABPC1-210ENST00000519363 MT1AP04731 61 aa4.56□□□□□ -1.68
PABPC1-210ENST00000519363 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
PABPC1-210ENST00000519363 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
PABPC1-210ENST00000519363 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
PABPC1-210ENST00000519363 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
PABPC1-210ENST00000519363 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
PABPC1-210ENST00000519363 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
PABPC1-210ENST00000519363 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
PABPC1-210ENST00000519363 MT4P47944 62 aa4.28□□□□□ -1.72
PABPC1-210ENST00000519363 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
PABPC1-210ENST00000519363 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
PABPC1-210ENST00000519363 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
PABPC1-210ENST00000519363 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
PABPC1-210ENST00000519363 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
PABPC1-210ENST00000519363 MT3P25713 68 aa4.12□□□□□ -1.75
PABPC1-210ENST00000519363 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
PABPC1-210ENST00000519363 GPR98Q8WXG9 6306 aa4.09□□□□□ -1.75
PABPC1-210ENST00000519363 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
PABPC1-210ENST00000519363 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
PABPC1-210ENST00000519363 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
PABPC1-210ENST00000519363 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
PABPC1-210ENST00000519363 INE1O15225 51 aa3.87□□□□□ -1.79
PABPC1-210ENST00000519363 H3BS24 57 aa3.82□□□□□ -1.8
PABPC1-210ENST00000519363 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
PABPC1-210ENST00000519363 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
PABPC1-210ENST00000519363 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
PABPC1-210ENST00000519363 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
PABPC1-210ENST00000519363 KRTAP5-10Q6L8G5 202 aa3.64□□□□□ -1.83
PABPC1-210ENST00000519363 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
PABPC1-210ENST00000519363 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
PABPC1-210ENST00000519363 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
PABPC1-210ENST00000519363 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
PABPC1-210ENST00000519363 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
PABPC1-210ENST00000519363 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
PABPC1-210ENST00000519363 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
PABPC1-210ENST00000519363 PRM1P04553 51 aa3.21□□□□□ -1.9
PABPC1-210ENST00000519363 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
PABPC1-210ENST00000519363 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-210ENST00000519363 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
PABPC1-210ENST00000519363 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
PABPC1-210ENST00000519363 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
PABPC1-210ENST00000519363 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
PABPC1-210ENST00000519363 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
PABPC1-210ENST00000519363 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
PABPC1-210ENST00000519363 PHGR1C9JFL3 82 aa2.56□□□□□ -2
PABPC1-210ENST00000519363 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
PABPC1-210ENST00000519363 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
PABPC1-210ENST00000519363 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
PABPC1-210ENST00000519363 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms