RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
SPIDR-210ENST00000519362 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
SPIDR-210ENST00000519362 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
SPIDR-210ENST00000519362 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
SPIDR-210ENST00000519362 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
SPIDR-210ENST00000519362 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
SPIDR-210ENST00000519362 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
SPIDR-210ENST00000519362 KMT2DO14686 5537 aa4.59□□□□□ -1.67
SPIDR-210ENST00000519362 KRTAP19-6Q3LI70 58 aa4.59□□□□□ -1.67
SPIDR-210ENST00000519362 SYNE2Q8WXH0 6885 aaKnown RBP4.54□□□□□ -1.68
SPIDR-210ENST00000519362 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
SPIDR-210ENST00000519362 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
SPIDR-210ENST00000519362 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.69
SPIDR-210ENST00000519362 MT1EP04732 61 aa4.41□□□□□ -1.7
SPIDR-210ENST00000519362 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
SPIDR-210ENST00000519362 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
SPIDR-210ENST00000519362 MT1LQ93083 61 aa4.37□□□□□ -1.71
SPIDR-210ENST00000519362 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
SPIDR-210ENST00000519362 NEBP20929 6669 aa4.28□□□□□ -1.72
SPIDR-210ENST00000519362 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
SPIDR-210ENST00000519362 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
SPIDR-210ENST00000519362 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
SPIDR-210ENST00000519362 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
SPIDR-210ENST00000519362 MT1GP13640 62 aa4.15□□□□□ -1.75
SPIDR-210ENST00000519362 MT1MQ8N339 61 aa4.13□□□□□ -1.75
SPIDR-210ENST00000519362 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
SPIDR-210ENST00000519362 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
SPIDR-210ENST00000519362 SPRR2FQ96RM1 72 aa4.1□□□□□ -1.75
SPIDR-210ENST00000519362 LCE4AQ5TA78 99 aa4.09□□□□□ -1.75
SPIDR-210ENST00000519362 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
SPIDR-210ENST00000519362 INE1O15225 51 aa4.07□□□□□ -1.76
SPIDR-210ENST00000519362 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
SPIDR-210ENST00000519362 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
SPIDR-210ENST00000519362 KRTAP2-1Q9BYU5 128 aa4.07□□□□□ -1.76
SPIDR-210ENST00000519362 SPRR2EP22531 72 aa3.98□□□□□ -1.77
SPIDR-210ENST00000519362 SPRR2BP35325 72 aa3.98□□□□□ -1.77
SPIDR-210ENST00000519362 SPRR2AP35326 72 aa3.98□□□□□ -1.77
SPIDR-210ENST00000519362 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
SPIDR-210ENST00000519362 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
SPIDR-210ENST00000519362 SPRR2DP22532 72 aa3.85□□□□□ -1.79
SPIDR-210ENST00000519362 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
SPIDR-210ENST00000519362 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
SPIDR-210ENST00000519362 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
SPIDR-210ENST00000519362 MT1AP04731 61 aa3.69□□□□□ -1.82
SPIDR-210ENST00000519362 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
SPIDR-210ENST00000519362 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
SPIDR-210ENST00000519362 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
SPIDR-210ENST00000519362 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
SPIDR-210ENST00000519362 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
SPIDR-210ENST00000519362 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
SPIDR-210ENST00000519362 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
SPIDR-210ENST00000519362 MT4P47944 62 aa3.38□□□□□ -1.87
SPIDR-210ENST00000519362 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
SPIDR-210ENST00000519362 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
SPIDR-210ENST00000519362 MT3P25713 68 aa3.32□□□□□ -1.88
SPIDR-210ENST00000519362 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
SPIDR-210ENST00000519362 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
SPIDR-210ENST00000519362 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
SPIDR-210ENST00000519362 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
SPIDR-210ENST00000519362 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
SPIDR-210ENST00000519362 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
SPIDR-210ENST00000519362 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
SPIDR-210ENST00000519362 PRM1P04553 51 aa3.05□□□□□ -1.92
SPIDR-210ENST00000519362 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
SPIDR-210ENST00000519362 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
SPIDR-210ENST00000519362 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
SPIDR-210ENST00000519362 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
SPIDR-210ENST00000519362 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
SPIDR-210ENST00000519362 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
SPIDR-210ENST00000519362 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
SPIDR-210ENST00000519362 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.98
SPIDR-210ENST00000519362 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
SPIDR-210ENST00000519362 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
SPIDR-210ENST00000519362 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
SPIDR-210ENST00000519362 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
SPIDR-210ENST00000519362 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
SPIDR-210ENST00000519362 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
SPIDR-210ENST00000519362 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 93.1 ms