RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
CTNNA1-215ENST00000519309 MT1MQ8N339 61 aa3.03□□□□□ -1.92
CTNNA1-215ENST00000519309 ANAPC13Q9BS18 74 aa3.03□□□□□ -1.92
CTNNA1-215ENST00000519309 A0A0D9SG42 100 aa3.01□□□□□ -1.93
CTNNA1-215ENST00000519309 H7BZZ5 65 aa3.01□□□□□ -1.93
CTNNA1-215ENST00000519309 SPATA8Q6RVD6 105 aa3.01□□□□□ -1.93
CTNNA1-215ENST00000519309 CAMK2N1Q7Z7J9 78 aa3.01□□□□□ -1.93
CTNNA1-215ENST00000519309 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
CTNNA1-215ENST00000519309 KRTAP12-1P59990 96 aa2.97□□□□□ -1.93
CTNNA1-215ENST00000519309 SERP1Q9Y6X1 66 aa2.97□□□□□ -1.93
CTNNA1-215ENST00000519309 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
CTNNA1-215ENST00000519309 SEC61GP60059 68 aa2.96□□□□□ -1.94
CTNNA1-215ENST00000519309 KRTAP19-5Q3LI72 72 aa2.96□□□□□ -1.94
CTNNA1-215ENST00000519309 MT1LQ93083 61 aa2.96□□□□□ -1.94
CTNNA1-215ENST00000519309 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
CTNNA1-215ENST00000519309 A0A1B0GU33 70 aa2.94□□□□□ -1.94
CTNNA1-215ENST00000519309 SPINT4Q6UDR6 99 aa2.94□□□□□ -1.94
CTNNA1-215ENST00000519309 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
CTNNA1-215ENST00000519309 CCDC179H3BU77 68 aa2.92□□□□□ -1.94
CTNNA1-215ENST00000519309 A8MU10 97 aa2.91□□□□□ -1.94
CTNNA1-215ENST00000519309 A0A1B0GU69 56 aa2.89□□□□□ -1.95
CTNNA1-215ENST00000519309 TMEM258P61165 79 aa2.85□□□□□ -1.95
CTNNA1-215ENST00000519309 C10orf95Q9H7T3 257 aa2.85□□□□□ -1.95
CTNNA1-215ENST00000519309 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
CTNNA1-215ENST00000519309 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
CTNNA1-215ENST00000519309 SMIM26A0A096LP01 95 aa2.83□□□□□ -1.96
CTNNA1-215ENST00000519309 ATP5EP56381 51 aaPredicted RBP2.83□□□□□ -1.96
CTNNA1-215ENST00000519309 MT3P25713 68 aa2.81□□□□□ -1.96
CTNNA1-215ENST00000519309 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
CTNNA1-215ENST00000519309 LINC01558Q9Y6Z2 57 aa2.8□□□□□ -1.96
CTNNA1-215ENST00000519309 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.97
CTNNA1-215ENST00000519309 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
CTNNA1-215ENST00000519309 PRR15LQ9BU68 103 aa2.77□□□□□ -1.97
CTNNA1-215ENST00000519309 TNP1P09430 55 aa2.76□□□□□ -1.97
CTNNA1-215ENST00000519309 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
CTNNA1-215ENST00000519309 RPS28P62857 69 aaKnown RBP2.74□□□□□ -1.97
CTNNA1-215ENST00000519309 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
CTNNA1-215ENST00000519309 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
CTNNA1-215ENST00000519309 UQCR11O14957 56 aa2.7□□□□□ -1.98
CTNNA1-215ENST00000519309 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
CTNNA1-215ENST00000519309 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
CTNNA1-215ENST00000519309 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
CTNNA1-215ENST00000519309 V9GYY9 64 aa2.67□□□□□ -1.98
CTNNA1-215ENST00000519309 MIR22HGQ0VDD5 57 aa2.66□□□□□ -1.98
CTNNA1-215ENST00000519309 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
CTNNA1-215ENST00000519309 PSPHP1O15172 72 aa2.63□□□□□ -1.99
CTNNA1-215ENST00000519309 Q1T7F1 81 aa2.59□□□□□ -1.99
CTNNA1-215ENST00000519309 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
CTNNA1-215ENST00000519309 K7ERS5 55 aa2.56□□□□□ -2
CTNNA1-215ENST00000519309 BRK1Q8WUW1 75 aa2.55□□□□□ -2
CTNNA1-215ENST00000519309 A6NED7 52 aa2.54□□□□□ -2
CTNNA1-215ENST00000519309 MT1AP04731 61 aa2.52□□□□□ -2.01
CTNNA1-215ENST00000519309 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
CTNNA1-215ENST00000519309 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
CTNNA1-215ENST00000519309 PRO0628Q9UI54 55 aa2.5□□□□□ -2.01
CTNNA1-215ENST00000519309 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
CTNNA1-215ENST00000519309 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
CTNNA1-215ENST00000519309 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
CTNNA1-215ENST00000519309 CDC42SE1Q9NRR8 79 aa2.46□□□□□ -2.02
CTNNA1-215ENST00000519309 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
CTNNA1-215ENST00000519309 KRTAP9-6A8MVA2 160 aa2.42□□□□□ -2.02
CTNNA1-215ENST00000519309 ROMO1P60602 79 aa2.42□□□□□ -2.02
CTNNA1-215ENST00000519309 PMAIP1Q13794 54 aa2.41□□□□□ -2.02
CTNNA1-215ENST00000519309 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
CTNNA1-215ENST00000519309 KTN1-AS1Q86SY8 53 aa2.32□□□□□ -2.04
CTNNA1-215ENST00000519309 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
CTNNA1-215ENST00000519309 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
CTNNA1-215ENST00000519309 LUZP6Q538Z0 58 aa2.23□□□□□ -2.05
CTNNA1-215ENST00000519309 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
CTNNA1-215ENST00000519309 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
CTNNA1-215ENST00000519309 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
CTNNA1-215ENST00000519309 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
CTNNA1-215ENST00000519309 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
CTNNA1-215ENST00000519309 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
CTNNA1-215ENST00000519309 INE1O15225 51 aa1.54□□□□□ -2.16
CTNNA1-215ENST00000519309 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
CTNNA1-215ENST00000519309 PRM1P04553 51 aa1.27□□□□□ -2.21
CTNNA1-215ENST00000519309 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 116.6 ms