RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 RYR2Q92736 4967 aa1.7□□□□□ -2.14
SQLE-203ENST00000518931 DNAH5Q8TE73 4624 aa1.7□□□□□ -2.14
SQLE-203ENST00000518931 FLGP20930 4061 aaPredicted RBP1.7□□□□□ -2.14
SQLE-203ENST00000518931 ZNF469Q96JG9 3925 aaPredicted RBP1.69□□□□□ -2.14
SQLE-203ENST00000518931 PKHD1L1Q86WI1 4243 aa1.69□□□□□ -2.14
SQLE-203ENST00000518931 ZANQ9Y493 2812 aa1.68□□□□□ -2.14
SQLE-203ENST00000518931 SVEP1Q4LDE5 3571 aa1.68□□□□□ -2.14
SQLE-203ENST00000518931 TENM3Q9P273 2699 aa1.68□□□□□ -2.14
SQLE-203ENST00000518931 LRP1Q07954 4544 aaKnown RBP1.67□□□□□ -2.14
SQLE-203ENST00000518931 PLECQ15149 4684 aaKnown RBP1.66□□□□□ -2.14
SQLE-203ENST00000518931 SMR3BP02814 79 aaPredicted RBP1.64□□□□□ -2.15
SQLE-203ENST00000518931 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
SQLE-203ENST00000518931 DYNC1H1Q14204 4646 aaKnown RBP1.62□□□□□ -2.15
SQLE-203ENST00000518931 FAT2Q9NYQ8 4349 aa1.62□□□□□ -2.15
SQLE-203ENST00000518931 HERC1Q15751 4861 aa1.61□□□□□ -2.15
SQLE-203ENST00000518931 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
SQLE-203ENST00000518931 MUC2Q02817 5179 aa1.6□□□□□ -2.15
SQLE-203ENST00000518931 ABCA13Q86UQ4 5058 aa1.59□□□□□ -2.16
SQLE-203ENST00000518931 STARD9Q9P2P6 4700 aa1.58□□□□□ -2.16
SQLE-203ENST00000518931 TNXBP22105 4242 aa1.56□□□□□ -2.16
SQLE-203ENST00000518931 KRTAP19-5Q3LI72 72 aa1.52□□□□□ -2.17
SQLE-203ENST00000518931 PKHD1P08F94 4074 aa1.52□□□□□ -2.17
SQLE-203ENST00000518931 LPAP08519 4548 aa1.51□□□□□ -2.17
SQLE-203ENST00000518931 LRP1BQ9NZR2 4599 aa1.5□□□□□ -2.17
SQLE-203ENST00000518931 SPRR2GQ9BYE4 73 aa1.49□□□□□ -2.17
SQLE-203ENST00000518931 PRM1P04553 51 aa1.48□□□□□ -2.17
SQLE-203ENST00000518931 FAT4Q6V0I7 4981 aa1.48□□□□□ -2.17
SQLE-203ENST00000518931 MUC17Q685J3 4493 aa1.47□□□□□ -2.17
SQLE-203ENST00000518931 FAT1Q14517 4588 aa1.46□□□□□ -2.18
SQLE-203ENST00000518931 FSIP2Q5CZC0 6907 aa1.44□□□□□ -2.18
SQLE-203ENST00000518931 KRTAP19-3Q7Z4W3 81 aa1.43□□□□□ -2.18
SQLE-203ENST00000518931 HMCN2Q8NDA2 5059 aa1.42□□□□□ -2.18
SQLE-203ENST00000518931 RNF213Q63HN8 5207 aa1.42□□□□□ -2.18
SQLE-203ENST00000518931 MT1AP04731 61 aa1.41□□□□□ -2.18
SQLE-203ENST00000518931 KRTAP19-2Q3LHN2 52 aa1.41□□□□□ -2.18
SQLE-203ENST00000518931 KRTAP19-8Q3LI54 63 aa1.36□□□□□ -2.19
SQLE-203ENST00000518931 MT1XP80297 61 aa1.35□□□□□ -2.19
SQLE-203ENST00000518931 SSPOA2VEC9 5147 aa1.33□□□□□ -2.2
SQLE-203ENST00000518931 MT1EP04732 61 aa1.33□□□□□ -2.2
SQLE-203ENST00000518931 LRP2P98164 4655 aa1.31□□□□□ -2.2
SQLE-203ENST00000518931 NEBP20929 6669 aa1.31□□□□□ -2.2
SQLE-203ENST00000518931 GPR98Q8WXG9 6306 aa1.3□□□□□ -2.2
SQLE-203ENST00000518931 SYNE2Q8WXH0 6885 aaKnown RBP1.3□□□□□ -2.2
SQLE-203ENST00000518931 KRTAP20-1Q3LI63 56 aa1.29□□□□□ -2.2
SQLE-203ENST00000518931 MT1LQ93083 61 aa1.29□□□□□ -2.2
SQLE-203ENST00000518931 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
SQLE-203ENST00000518931 MT1HL1P0DM35 61 aa1.26□□□□□ -2.21
SQLE-203ENST00000518931 MT1BP07438 61 aa1.24□□□□□ -2.21
SQLE-203ENST00000518931 SPRR2FQ96RM1 72 aa1.23□□□□□ -2.21
SQLE-203ENST00000518931 SPRR2BP35325 72 aa1.22□□□□□ -2.21
SQLE-203ENST00000518931 SPRR2AP35326 72 aa1.22□□□□□ -2.21
SQLE-203ENST00000518931 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
SQLE-203ENST00000518931 SPRR2DP22532 72 aa1.2□□□□□ -2.22
SQLE-203ENST00000518931 KRTAP19-7Q3SYF9 63 aa1.2□□□□□ -2.22
SQLE-203ENST00000518931 MACF1Q9UPN3 7388 aaKnown RBP1.19□□□□□ -2.22
SQLE-203ENST00000518931 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
SQLE-203ENST00000518931 USH2AO75445 5202 aa1.17□□□□□ -2.22
SQLE-203ENST00000518931 KMT2DO14686 5537 aa1.16□□□□□ -2.22
SQLE-203ENST00000518931 MT1HP80294 61 aa1.16□□□□□ -2.22
SQLE-203ENST00000518931 SPRR2EP22531 72 aa1.15□□□□□ -2.23
SQLE-203ENST00000518931 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
SQLE-203ENST00000518931 AHNAK2Q8IVF2 5795 aa1.12□□□□□ -2.23
SQLE-203ENST00000518931 MT2AP02795 61 aa1.12□□□□□ -2.23
SQLE-203ENST00000518931 MT1FP04733 61 aa1.12□□□□□ -2.23
SQLE-203ENST00000518931 MT1GP13640 62 aa1.11□□□□□ -2.23
SQLE-203ENST00000518931 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
SQLE-203ENST00000518931 MUC12Q9UKN1 5478 aa1.11□□□□□ -2.23
SQLE-203ENST00000518931 MDN1Q9NU22 5596 aa1.04□□□□□ -2.24
SQLE-203ENST00000518931 MT1MQ8N339 61 aa1.03□□□□□ -2.24
SQLE-203ENST00000518931 AHNAKQ09666 5890 aaKnown RBP1.02□□□□□ -2.25
SQLE-203ENST00000518931 KRTAP6-1Q3LI64 71 aa1.01□□□□□ -2.25
SQLE-203ENST00000518931 MUC5BQ9HC84 5762 aaPredicted RBP1□□□□□ -2.25
SQLE-203ENST00000518931 DSTQ03001 7570 aaKnown RBP0.96□□□□□ -2.26
SQLE-203ENST00000518931 KRTAP19-6Q3LI70 58 aa0.96□□□□□ -2.26
SQLE-203ENST00000518931 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
SQLE-203ENST00000518931 MT4P47944 62 aa0.8□□□□□ -2.28
SQLE-203ENST00000518931 KRTAP20-2Q3LI61 65 aa0.66□□□□□ -2.3
SQLE-203ENST00000518931 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms