RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 KRTAP19-3Q7Z4W3 81 aa8.77□□□□□ -1.01
PCM1-209ENST00000518930 KRTAP20-1Q3LI63 56 aa8.71□□□□□ -1.02
PCM1-209ENST00000518930 LCE5AQ5TCM9 118 aa8.69□□□□□ -1.02
PCM1-209ENST00000518930 PP632Q6XCG6 107 aa8.67□□□□□ -1.02
PCM1-209ENST00000518930 MT1LQ93083 61 aa8.66□□□□□ -1.02
PCM1-209ENST00000518930 MT1GP13640 62 aa8.63□□□□□ -1.03
PCM1-209ENST00000518930 KRTAP2-3P0C7H8 128 aa8.62□□□□□ -1.03
PCM1-209ENST00000518930 KRTAP2-4Q9BYR9 128 aa8.62□□□□□ -1.03
PCM1-209ENST00000518930 PMAIP1Q13794 54 aa8.53□□□□□ -1.04
PCM1-209ENST00000518930 LCE3BQ5TA77 95 aa8.49□□□□□ -1.05
PCM1-209ENST00000518930 MT1MQ8N339 61 aa8.49□□□□□ -1.05
PCM1-209ENST00000518930 PRO0628Q9UI54 55 aa8.41□□□□□ -1.06
PCM1-209ENST00000518930 KRTAP15-1Q3LI76 137 aa8.4□□□□□ -1.06
PCM1-209ENST00000518930 KRTAP2-2Q9BYT5 123 aa8.38□□□□□ -1.07
PCM1-209ENST00000518930 KRTAP2-1Q9BYU5 128 aa8.38□□□□□ -1.07
PCM1-209ENST00000518930 DSTQ03001 7570 aaKnown RBP8.36□□□□□ -1.07
PCM1-209ENST00000518930 KRTAP19-4Q3LI73 84 aa8.31□□□□□ -1.08
PCM1-209ENST00000518930 KRTAP4-7Q9BYR0 210 aa8.25□□□□□ -1.09
PCM1-209ENST00000518930 KRTAP4-3Q9BYR4 195 aa8.25□□□□□ -1.09
PCM1-209ENST00000518930 LCE3CQ5T5A8 94 aa8.13□□□□□ -1.11
PCM1-209ENST00000518930 PRAC1Q96KF2 57 aa8.04□□□□□ -1.12
PCM1-209ENST00000518930 KTN1-AS1Q86SY8 53 aa7.92□□□□□ -1.14
PCM1-209ENST00000518930 LOC100996750A0A140TA64 210 aa7.79□□□□□ -1.16
PCM1-209ENST00000518930 LCE4AQ5TA78 99 aa7.79□□□□□ -1.16
PCM1-209ENST00000518930 KRTAP5-4Q6L8H1 288 aa7.72□□□□□ -1.17
PCM1-209ENST00000518930 KRTAP4-9Q9BYQ8 210 aa7.71□□□□□ -1.18
PCM1-209ENST00000518930 KRTAP5-5Q701N2 237 aaPredicted RBP7.7□□□□□ -1.18
PCM1-209ENST00000518930 MT4P47944 62 aa7.63□□□□□ -1.19
PCM1-209ENST00000518930 LCE1DQ5T752 114 aa7.62□□□□□ -1.19
PCM1-209ENST00000518930 KRTAP9-6A8MVA2 160 aa7.6□□□□□ -1.19
PCM1-209ENST00000518930 H3BS24 57 aa7.59□□□□□ -1.19
PCM1-209ENST00000518930 SVIPQ8NHG7 77 aa7.57□□□□□ -1.2
PCM1-209ENST00000518930 KRTAP4-6Q9BYQ5 205 aa7.57□□□□□ -1.2
PCM1-209ENST00000518930 GPR98Q8WXG9 6306 aa7.55□□□□□ -1.2
PCM1-209ENST00000518930 HMCN1Q96RW7 5635 aa7.52□□□□□ -1.21
PCM1-209ENST00000518930 KRTAP12-4P60329 112 aa7.41□□□□□ -1.22
PCM1-209ENST00000518930 MT1AP04731 61 aa7.39□□□□□ -1.23
PCM1-209ENST00000518930 SYNE1Q8NF91 8797 aaKnown RBP7.34□□□□□ -1.24
PCM1-209ENST00000518930 SPRR5A0A1B0GTR4 108 aa7.31□□□□□ -1.24
PCM1-209ENST00000518930 KRTAP6-1Q3LI64 71 aa7.29□□□□□ -1.24
PCM1-209ENST00000518930 KRTAP20-2Q3LI61 65 aa7.27□□□□□ -1.25
PCM1-209ENST00000518930 KRTAP9-4Q9BYQ2 154 aa7.06□□□□□ -1.28
PCM1-209ENST00000518930 AHNAK2Q8IVF2 5795 aa7.04□□□□□ -1.28
PCM1-209ENST00000518930 KRTAP5-3Q6L8H2 238 aa7□□□□□ -1.29
PCM1-209ENST00000518930 KRTAP4-12Q9BQ66 201 aa6.93□□□□□ -1.3
PCM1-209ENST00000518930 KRTAP5-2Q701N4 177 aa6.87□□□□□ -1.31
PCM1-209ENST00000518930 KRTAP6-2Q3LI66 62 aa6.86□□□□□ -1.31
PCM1-209ENST00000518930 LUZP6Q538Z0 58 aa6.76□□□□□ -1.33
PCM1-209ENST00000518930 MT3P25713 68 aa6.75□□□□□ -1.33
PCM1-209ENST00000518930 KRTAP5-10Q6L8G5 202 aa6.74□□□□□ -1.33
PCM1-209ENST00000518930 KRTAP9-9Q9BYP9 154 aa6.61□□□□□ -1.35
PCM1-209ENST00000518930 KRTAP5-7Q6L8G8 165 aa6.5□□□□□ -1.37
PCM1-209ENST00000518930 KRTAP4-11Q9BYQ6 195 aa6.48□□□□□ -1.37
PCM1-209ENST00000518930 OBSCNQ5VST9 7968 aa6.36□□□□□ -1.39
PCM1-209ENST00000518930 KRTAP5-8O75690 187 aa6.24□□□□□ -1.41
PCM1-209ENST00000518930 KRTAP5-1Q6L8H4 278 aa6.04□□□□□ -1.44
PCM1-209ENST00000518930 LCE1EQ5T753 118 aa6.03□□□□□ -1.44
PCM1-209ENST00000518930 NDUFAF8A1L188 74 aa5.99□□□□□ -1.45
PCM1-209ENST00000518930 LCE3DQ9BYE3 92 aa5.99□□□□□ -1.45
PCM1-209ENST00000518930 MUC5ACP98088 5654 aa5.93□□□□□ -1.46
PCM1-209ENST00000518930 KRTAP4-2Q9BYR5 136 aa5.91□□□□□ -1.46
PCM1-209ENST00000518930 AHNAKQ09666 5890 aaKnown RBP5.79□□□□□ -1.48
PCM1-209ENST00000518930 LCE3EQ5T5B0 92 aa5.74□□□□□ -1.49
PCM1-209ENST00000518930 MUC5BQ9HC84 5762 aaPredicted RBP5.71□□□□□ -1.5
PCM1-209ENST00000518930 LCE1BQ5T7P3 118 aa5.66□□□□□ -1.5
PCM1-209ENST00000518930 LCE1CQ5T751 118 aa5.59□□□□□ -1.51
PCM1-209ENST00000518930 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.15□□□□□ -1.59
PCM1-209ENST00000518930 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
PCM1-209ENST00000518930 KRTAP5-11Q6L8G4 156 aa5.02□□□□□ -1.61
PCM1-209ENST00000518930 INE1O15225 51 aa4.93□□□□□ -1.62
PCM1-209ENST00000518930 KRTAP21-2Q3LI59 83 aa4.78□□□□□ -1.64
PCM1-209ENST00000518930 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
PCM1-209ENST00000518930 PRM1P04553 51 aa4.65□□□□□ -1.67
PCM1-209ENST00000518930 PHGR1C9JFL3 82 aa4.3□□□□□ -1.72
PCM1-209ENST00000518930 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
PCM1-209ENST00000518930 MUC19Q7Z5P9 8384 aa3.86□□□□□ -1.79
PCM1-209ENST00000518930 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
PCM1-209ENST00000518930 MUC16Q8WXI7 14507 aa2.84□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 57.2 ms