RNA–Protein interactions for RNA: ENST00000518691.1

ARFGAP1-208, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 1,162 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-208ENST00000518691 KRTAP4-3Q9BYR4 195 aa6.69□□□□□ -1.34
ARFGAP1-208ENST00000518691 KRTAP5-4Q6L8H1 288 aa6.67□□□□□ -1.34
ARFGAP1-208ENST00000518691 MT4P47944 62 aa6.66□□□□□ -1.34
ARFGAP1-208ENST00000518691 PRR15LQ9BU68 103 aa6.63□□□□□ -1.35
ARFGAP1-208ENST00000518691 ATP5EP56381 51 aaPredicted RBP6.59□□□□□ -1.35
ARFGAP1-208ENST00000518691 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
ARFGAP1-208ENST00000518691 AHNAK2Q8IVF2 5795 aa6.56□□□□□ -1.36
ARFGAP1-208ENST00000518691 TMEM258P61165 79 aa6.54□□□□□ -1.36
ARFGAP1-208ENST00000518691 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
ARFGAP1-208ENST00000518691 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
ARFGAP1-208ENST00000518691 KRTAP4-7Q9BYR0 210 aa6.5□□□□□ -1.37
ARFGAP1-208ENST00000518691 UQCR11O14957 56 aa6.43□□□□□ -1.38
ARFGAP1-208ENST00000518691 KRTAP5-10Q6L8G5 202 aa6.42□□□□□ -1.38
ARFGAP1-208ENST00000518691 KRTAP5-5Q701N2 237 aaPredicted RBP6.35□□□□□ -1.39
ARFGAP1-208ENST00000518691 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
ARFGAP1-208ENST00000518691 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
ARFGAP1-208ENST00000518691 KRTAP20-2Q3LI61 65 aa6.27□□□□□ -1.41
ARFGAP1-208ENST00000518691 MIR22HGQ0VDD5 57 aa6.26□□□□□ -1.41
ARFGAP1-208ENST00000518691 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
ARFGAP1-208ENST00000518691 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
ARFGAP1-208ENST00000518691 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
ARFGAP1-208ENST00000518691 KRTAP5-7Q6L8G8 165 aa6.19□□□□□ -1.42
ARFGAP1-208ENST00000518691 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
ARFGAP1-208ENST00000518691 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
ARFGAP1-208ENST00000518691 K7ERS5 55 aa6.14□□□□□ -1.43
ARFGAP1-208ENST00000518691 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
ARFGAP1-208ENST00000518691 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
ARFGAP1-208ENST00000518691 V9GYY9 64 aa6.12□□□□□ -1.43
ARFGAP1-208ENST00000518691 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
ARFGAP1-208ENST00000518691 Q1T7F1 81 aa6.05□□□□□ -1.44
ARFGAP1-208ENST00000518691 PSPHP1O15172 72 aa6.03□□□□□ -1.44
ARFGAP1-208ENST00000518691 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
ARFGAP1-208ENST00000518691 SVIPQ8NHG7 77 aa5.93□□□□□ -1.46
ARFGAP1-208ENST00000518691 MT1AP04731 61 aa5.84□□□□□ -1.47
ARFGAP1-208ENST00000518691 KRTAP5-2Q701N4 177 aa5.83□□□□□ -1.48
ARFGAP1-208ENST00000518691 A6NED7 52 aa5.81□□□□□ -1.48
ARFGAP1-208ENST00000518691 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
ARFGAP1-208ENST00000518691 CDC42SE1Q9NRR8 79 aa5.81□□□□□ -1.48
ARFGAP1-208ENST00000518691 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
ARFGAP1-208ENST00000518691 ROMO1P60602 79 aa5.73□□□□□ -1.49
ARFGAP1-208ENST00000518691 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
ARFGAP1-208ENST00000518691 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
ARFGAP1-208ENST00000518691 BRK1Q8WUW1 75 aa5.63□□□□□ -1.51
ARFGAP1-208ENST00000518691 H3BS24 57 aa5.61□□□□□ -1.51
ARFGAP1-208ENST00000518691 KRTAP5-8O75690 187 aa5.58□□□□□ -1.52
ARFGAP1-208ENST00000518691 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
ARFGAP1-208ENST00000518691 OBSCNQ5VST9 7968 aa5.5□□□□□ -1.53
ARFGAP1-208ENST00000518691 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
ARFGAP1-208ENST00000518691 PRO0628Q9UI54 55 aa5.44□□□□□ -1.54
ARFGAP1-208ENST00000518691 MUC5BQ9HC84 5762 aaPredicted RBP5.43□□□□□ -1.54
ARFGAP1-208ENST00000518691 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
ARFGAP1-208ENST00000518691 MT3P25713 68 aa5.34□□□□□ -1.55
ARFGAP1-208ENST00000518691 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
ARFGAP1-208ENST00000518691 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
ARFGAP1-208ENST00000518691 KRTAP5-1Q6L8H4 278 aa5.24□□□□□ -1.57
ARFGAP1-208ENST00000518691 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
ARFGAP1-208ENST00000518691 LCE1EQ5T753 118 aa4.98□□□□□ -1.61
ARFGAP1-208ENST00000518691 PRAC1Q96KF2 57 aa4.94□□□□□ -1.62
ARFGAP1-208ENST00000518691 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
ARFGAP1-208ENST00000518691 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
ARFGAP1-208ENST00000518691 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
ARFGAP1-208ENST00000518691 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
ARFGAP1-208ENST00000518691 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
ARFGAP1-208ENST00000518691 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
ARFGAP1-208ENST00000518691 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
ARFGAP1-208ENST00000518691 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
ARFGAP1-208ENST00000518691 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
ARFGAP1-208ENST00000518691 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
ARFGAP1-208ENST00000518691 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
ARFGAP1-208ENST00000518691 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
ARFGAP1-208ENST00000518691 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
ARFGAP1-208ENST00000518691 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
ARFGAP1-208ENST00000518691 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
ARFGAP1-208ENST00000518691 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
ARFGAP1-208ENST00000518691 INE1O15225 51 aa3.27□□□□□ -1.89
ARFGAP1-208ENST00000518691 PRM1P04553 51 aa2.9□□□□□ -1.95
ARFGAP1-208ENST00000518691 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
ARFGAP1-208ENST00000518691 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 157.4 ms