RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 SPRR2DP22532 72 aa4.54□□□□□ -1.68
IGHV3-6-201ENST00000518407 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
IGHV3-6-201ENST00000518407 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
IGHV3-6-201ENST00000518407 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
IGHV3-6-201ENST00000518407 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
IGHV3-6-201ENST00000518407 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
IGHV3-6-201ENST00000518407 MT1LQ93083 61 aa4.5□□□□□ -1.69
IGHV3-6-201ENST00000518407 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
IGHV3-6-201ENST00000518407 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
IGHV3-6-201ENST00000518407 MT1GP13640 62 aa4.46□□□□□ -1.7
IGHV3-6-201ENST00000518407 MT1MQ8N339 61 aa4.41□□□□□ -1.7
IGHV3-6-201ENST00000518407 LCE3BQ5TA77 95 aa4.39□□□□□ -1.71
IGHV3-6-201ENST00000518407 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
IGHV3-6-201ENST00000518407 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
IGHV3-6-201ENST00000518407 KRTAP2-1Q9BYU5 128 aa4.35□□□□□ -1.71
IGHV3-6-201ENST00000518407 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
IGHV3-6-201ENST00000518407 KTN1-AS1Q86SY8 53 aa4.33□□□□□ -1.72
IGHV3-6-201ENST00000518407 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
IGHV3-6-201ENST00000518407 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
IGHV3-6-201ENST00000518407 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
IGHV3-6-201ENST00000518407 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
IGHV3-6-201ENST00000518407 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
IGHV3-6-201ENST00000518407 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
IGHV3-6-201ENST00000518407 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
IGHV3-6-201ENST00000518407 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
IGHV3-6-201ENST00000518407 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
IGHV3-6-201ENST00000518407 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
IGHV3-6-201ENST00000518407 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
IGHV3-6-201ENST00000518407 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
IGHV3-6-201ENST00000518407 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
IGHV3-6-201ENST00000518407 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
IGHV3-6-201ENST00000518407 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
IGHV3-6-201ENST00000518407 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
IGHV3-6-201ENST00000518407 MT4P47944 62 aa3.94□□□□□ -1.78
IGHV3-6-201ENST00000518407 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
IGHV3-6-201ENST00000518407 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
IGHV3-6-201ENST00000518407 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
IGHV3-6-201ENST00000518407 MT1AP04731 61 aa3.83□□□□□ -1.8
IGHV3-6-201ENST00000518407 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
IGHV3-6-201ENST00000518407 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
IGHV3-6-201ENST00000518407 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
IGHV3-6-201ENST00000518407 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
IGHV3-6-201ENST00000518407 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
IGHV3-6-201ENST00000518407 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
IGHV3-6-201ENST00000518407 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
IGHV3-6-201ENST00000518407 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
IGHV3-6-201ENST00000518407 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
IGHV3-6-201ENST00000518407 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
IGHV3-6-201ENST00000518407 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
IGHV3-6-201ENST00000518407 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
IGHV3-6-201ENST00000518407 MT3P25713 68 aa3.46□□□□□ -1.86
IGHV3-6-201ENST00000518407 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
IGHV3-6-201ENST00000518407 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
IGHV3-6-201ENST00000518407 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
IGHV3-6-201ENST00000518407 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
IGHV3-6-201ENST00000518407 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
IGHV3-6-201ENST00000518407 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
IGHV3-6-201ENST00000518407 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
IGHV3-6-201ENST00000518407 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
IGHV3-6-201ENST00000518407 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
IGHV3-6-201ENST00000518407 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
IGHV3-6-201ENST00000518407 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
IGHV3-6-201ENST00000518407 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
IGHV3-6-201ENST00000518407 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
IGHV3-6-201ENST00000518407 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
IGHV3-6-201ENST00000518407 INE1O15225 51 aa2.77□□□□□ -1.97
IGHV3-6-201ENST00000518407 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
IGHV3-6-201ENST00000518407 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
IGHV3-6-201ENST00000518407 H3BS24 57 aa2.58□□□□□ -2
IGHV3-6-201ENST00000518407 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
IGHV3-6-201ENST00000518407 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
IGHV3-6-201ENST00000518407 PRM1P04553 51 aa2.37□□□□□ -2.03
IGHV3-6-201ENST00000518407 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
IGHV3-6-201ENST00000518407 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
IGHV3-6-201ENST00000518407 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
IGHV3-6-201ENST00000518407 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
IGHV3-6-201ENST00000518407 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 55.1 ms