RNA–Protein interactions for RNA: ENST00000518387.1

CTD-2270F17.1-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2270F17.1, Length 1,215 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2270F17.1-201ENST00000518387 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
CTD-2270F17.1-201ENST00000518387 A8MU10 97 aa4.24□□□□□ -1.73
CTD-2270F17.1-201ENST00000518387 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
CTD-2270F17.1-201ENST00000518387 PRR15LQ9BU68 103 aa4.23□□□□□ -1.73
CTD-2270F17.1-201ENST00000518387 SMIM26A0A096LP01 95 aa4.22□□□□□ -1.73
CTD-2270F17.1-201ENST00000518387 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
CTD-2270F17.1-201ENST00000518387 LINC01558Q9Y6Z2 57 aa4.19□□□□□ -1.74
CTD-2270F17.1-201ENST00000518387 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
CTD-2270F17.1-201ENST00000518387 SPRR2DP22532 72 aa4.13□□□□□ -1.75
CTD-2270F17.1-201ENST00000518387 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
CTD-2270F17.1-201ENST00000518387 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
CTD-2270F17.1-201ENST00000518387 UQCR11O14957 56 aa4.08□□□□□ -1.76
CTD-2270F17.1-201ENST00000518387 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
CTD-2270F17.1-201ENST00000518387 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
CTD-2270F17.1-201ENST00000518387 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
CTD-2270F17.1-201ENST00000518387 PSPHP1O15172 72 aa4.02□□□□□ -1.77
CTD-2270F17.1-201ENST00000518387 MT1EP04732 61 aa4.02□□□□□ -1.77
CTD-2270F17.1-201ENST00000518387 TNP1P09430 55 aa4.02□□□□□ -1.77
CTD-2270F17.1-201ENST00000518387 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
CTD-2270F17.1-201ENST00000518387 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
CTD-2270F17.1-201ENST00000518387 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
CTD-2270F17.1-201ENST00000518387 V9GYY9 64 aa3.99□□□□□ -1.77
CTD-2270F17.1-201ENST00000518387 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
CTD-2270F17.1-201ENST00000518387 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
CTD-2270F17.1-201ENST00000518387 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
CTD-2270F17.1-201ENST00000518387 Q1T7F1 81 aa3.97□□□□□ -1.77
CTD-2270F17.1-201ENST00000518387 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
CTD-2270F17.1-201ENST00000518387 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
CTD-2270F17.1-201ENST00000518387 PRO0628Q9UI54 55 aa3.93□□□□□ -1.78
CTD-2270F17.1-201ENST00000518387 K7ERS5 55 aa3.92□□□□□ -1.78
CTD-2270F17.1-201ENST00000518387 A6NED7 52 aa3.89□□□□□ -1.79
CTD-2270F17.1-201ENST00000518387 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
CTD-2270F17.1-201ENST00000518387 MT1GP13640 62 aa3.86□□□□□ -1.79
CTD-2270F17.1-201ENST00000518387 MT1LQ93083 61 aa3.86□□□□□ -1.79
CTD-2270F17.1-201ENST00000518387 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
CTD-2270F17.1-201ENST00000518387 BRK1Q8WUW1 75 aa3.85□□□□□ -1.79
CTD-2270F17.1-201ENST00000518387 MT1MQ8N339 61 aa3.83□□□□□ -1.8
CTD-2270F17.1-201ENST00000518387 KRTAP25-1Q3LHN0 102 aa3.82□□□□□ -1.8
CTD-2270F17.1-201ENST00000518387 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
CTD-2270F17.1-201ENST00000518387 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
CTD-2270F17.1-201ENST00000518387 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
CTD-2270F17.1-201ENST00000518387 CDC42SE1Q9NRR8 79 aa3.73□□□□□ -1.81
CTD-2270F17.1-201ENST00000518387 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
CTD-2270F17.1-201ENST00000518387 ROMO1P60602 79 aa3.67□□□□□ -1.82
CTD-2270F17.1-201ENST00000518387 PMAIP1Q13794 54 aa3.67□□□□□ -1.82
CTD-2270F17.1-201ENST00000518387 MT4P47944 62 aa3.62□□□□□ -1.83
CTD-2270F17.1-201ENST00000518387 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
CTD-2270F17.1-201ENST00000518387 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
CTD-2270F17.1-201ENST00000518387 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
CTD-2270F17.1-201ENST00000518387 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
CTD-2270F17.1-201ENST00000518387 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
CTD-2270F17.1-201ENST00000518387 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
CTD-2270F17.1-201ENST00000518387 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
CTD-2270F17.1-201ENST00000518387 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
CTD-2270F17.1-201ENST00000518387 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
CTD-2270F17.1-201ENST00000518387 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
CTD-2270F17.1-201ENST00000518387 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
CTD-2270F17.1-201ENST00000518387 MT1AP04731 61 aa3.28□□□□□ -1.88
CTD-2270F17.1-201ENST00000518387 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
CTD-2270F17.1-201ENST00000518387 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
CTD-2270F17.1-201ENST00000518387 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
CTD-2270F17.1-201ENST00000518387 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
CTD-2270F17.1-201ENST00000518387 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
CTD-2270F17.1-201ENST00000518387 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
CTD-2270F17.1-201ENST00000518387 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
CTD-2270F17.1-201ENST00000518387 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
CTD-2270F17.1-201ENST00000518387 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
CTD-2270F17.1-201ENST00000518387 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
CTD-2270F17.1-201ENST00000518387 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
CTD-2270F17.1-201ENST00000518387 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
CTD-2270F17.1-201ENST00000518387 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
CTD-2270F17.1-201ENST00000518387 INE1O15225 51 aa2.41□□□□□ -2.02
CTD-2270F17.1-201ENST00000518387 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
CTD-2270F17.1-201ENST00000518387 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
CTD-2270F17.1-201ENST00000518387 PRM1P04553 51 aa1.91□□□□□ -2.1
CTD-2270F17.1-201ENST00000518387 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
CTD-2270F17.1-201ENST00000518387 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 50.4 ms