RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 MACF1Q9UPN3 7388 aaKnown RBP5.14□□□□□ -1.59
PABPC1-205ENST00000518196 C10orf95Q9H7T3 257 aa5.12□□□□□ -1.59
PABPC1-205ENST00000518196 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
PABPC1-205ENST00000518196 TNP1P09430 55 aa5.08□□□□□ -1.6
PABPC1-205ENST00000518196 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
PABPC1-205ENST00000518196 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
PABPC1-205ENST00000518196 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
PABPC1-205ENST00000518196 KRTAP5-9P26371 169 aa5□□□□□ -1.61
PABPC1-205ENST00000518196 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
PABPC1-205ENST00000518196 KMT2DO14686 5537 aa4.98□□□□□ -1.61
PABPC1-205ENST00000518196 SYNE2Q8WXH0 6885 aaKnown RBP4.98□□□□□ -1.61
PABPC1-205ENST00000518196 KRTAP25-1Q3LHN0 102 aa4.97□□□□□ -1.61
PABPC1-205ENST00000518196 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
PABPC1-205ENST00000518196 ROMO1P60602 79 aa4.94□□□□□ -1.62
PABPC1-205ENST00000518196 LCE3AQ5TA76 89 aa4.89□□□□□ -1.63
PABPC1-205ENST00000518196 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
PABPC1-205ENST00000518196 KRTAP19-5Q3LI72 72 aa4.82□□□□□ -1.64
PABPC1-205ENST00000518196 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
PABPC1-205ENST00000518196 SPRR2EP22531 72 aa4.81□□□□□ -1.64
PABPC1-205ENST00000518196 SPRR2BP35325 72 aa4.81□□□□□ -1.64
PABPC1-205ENST00000518196 SPRR2AP35326 72 aa4.81□□□□□ -1.64
PABPC1-205ENST00000518196 MUC12Q9UKN1 5478 aa4.79□□□□□ -1.64
PABPC1-205ENST00000518196 MT1EP04732 61 aa4.78□□□□□ -1.64
PABPC1-205ENST00000518196 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
PABPC1-205ENST00000518196 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
PABPC1-205ENST00000518196 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
PABPC1-205ENST00000518196 MDN1Q9NU22 5596 aa4.71□□□□□ -1.66
PABPC1-205ENST00000518196 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
PABPC1-205ENST00000518196 KRTAP19-3Q7Z4W3 81 aa4.67□□□□□ -1.66
PABPC1-205ENST00000518196 NEBP20929 6669 aa4.66□□□□□ -1.66
PABPC1-205ENST00000518196 SPRR2DP22532 72 aa4.65□□□□□ -1.67
PABPC1-205ENST00000518196 MT1GP13640 62 aa4.63□□□□□ -1.67
PABPC1-205ENST00000518196 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
PABPC1-205ENST00000518196 MT1LQ93083 61 aa4.63□□□□□ -1.67
PABPC1-205ENST00000518196 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
PABPC1-205ENST00000518196 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
PABPC1-205ENST00000518196 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
PABPC1-205ENST00000518196 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
PABPC1-205ENST00000518196 MT1MQ8N339 61 aa4.53□□□□□ -1.68
PABPC1-205ENST00000518196 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
PABPC1-205ENST00000518196 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
PABPC1-205ENST00000518196 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
PABPC1-205ENST00000518196 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
PABPC1-205ENST00000518196 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
PABPC1-205ENST00000518196 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
PABPC1-205ENST00000518196 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
PABPC1-205ENST00000518196 MT4P47944 62 aa4.02□□□□□ -1.77
PABPC1-205ENST00000518196 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
PABPC1-205ENST00000518196 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
PABPC1-205ENST00000518196 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
PABPC1-205ENST00000518196 MT1AP04731 61 aa3.96□□□□□ -1.78
PABPC1-205ENST00000518196 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
PABPC1-205ENST00000518196 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
PABPC1-205ENST00000518196 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
PABPC1-205ENST00000518196 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
PABPC1-205ENST00000518196 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
PABPC1-205ENST00000518196 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
PABPC1-205ENST00000518196 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
PABPC1-205ENST00000518196 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
PABPC1-205ENST00000518196 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
PABPC1-205ENST00000518196 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
PABPC1-205ENST00000518196 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
PABPC1-205ENST00000518196 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
PABPC1-205ENST00000518196 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
PABPC1-205ENST00000518196 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
PABPC1-205ENST00000518196 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
PABPC1-205ENST00000518196 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
PABPC1-205ENST00000518196 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
PABPC1-205ENST00000518196 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
PABPC1-205ENST00000518196 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
PABPC1-205ENST00000518196 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
PABPC1-205ENST00000518196 INE1O15225 51 aa2.84□□□□□ -1.95
PABPC1-205ENST00000518196 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
PABPC1-205ENST00000518196 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
PABPC1-205ENST00000518196 PRM1P04553 51 aa2.53□□□□□ -2
PABPC1-205ENST00000518196 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
PABPC1-205ENST00000518196 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
PABPC1-205ENST00000518196 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 9.2 ms