RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 LCE3CQ5T5A8 94 aa8.24□□□□□ -1.09
SLIT3-204ENST00000518140 SPRR2FQ96RM1 72 aa8.21□□□□□ -1.1
SLIT3-204ENST00000518140 KRTAP4-7Q9BYR0 210 aa8.19□□□□□ -1.1
SLIT3-204ENST00000518140 KRTAP9-6A0A140TA67 174 aa8.18□□□□□ -1.1
SLIT3-204ENST00000518140 KRTAP19-3Q7Z4W3 81 aa8.06□□□□□ -1.12
SLIT3-204ENST00000518140 INE1O15225 51 aa8.05□□□□□ -1.12
SLIT3-204ENST00000518140 KRTAP5-9P26371 169 aa8.02□□□□□ -1.12
SLIT3-204ENST00000518140 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.02□□□□□ -1.13
SLIT3-204ENST00000518140 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
SLIT3-204ENST00000518140 MT1GP13640 62 aa7.97□□□□□ -1.13
SLIT3-204ENST00000518140 MT1MQ8N339 61 aa7.94□□□□□ -1.14
SLIT3-204ENST00000518140 KRTAP4-3Q9BYR4 195 aa7.94□□□□□ -1.14
SLIT3-204ENST00000518140 MDN1Q9NU22 5596 aa7.94□□□□□ -1.14
SLIT3-204ENST00000518140 LCE5AQ5TCM9 118 aa7.92□□□□□ -1.14
SLIT3-204ENST00000518140 KRTAP9-6A8MVA2 160 aa7.91□□□□□ -1.14
SLIT3-204ENST00000518140 LCE1AQ5T7P2 110 aa7.84□□□□□ -1.15
SLIT3-204ENST00000518140 KRTAP6-3Q3LI67 103 aa7.82□□□□□ -1.16
SLIT3-204ENST00000518140 SPRR2EP22531 72 aa7.74□□□□□ -1.17
SLIT3-204ENST00000518140 SPRR2BP35325 72 aa7.74□□□□□ -1.17
SLIT3-204ENST00000518140 SPRR2AP35326 72 aa7.74□□□□□ -1.17
SLIT3-204ENST00000518140 DSTQ03001 7570 aaKnown RBP7.7□□□□□ -1.18
SLIT3-204ENST00000518140 LOC100996750A0A140TA64 210 aa7.68□□□□□ -1.18
SLIT3-204ENST00000518140 KRTAP9-7A8MTY7 169 aa7.52□□□□□ -1.21
SLIT3-204ENST00000518140 KRTAP2-3P0C7H8 128 aa7.52□□□□□ -1.21
SLIT3-204ENST00000518140 KRTAP2-4Q9BYR9 128 aa7.52□□□□□ -1.21
SLIT3-204ENST00000518140 KRTAP2-1Q9BYU5 128 aa7.52□□□□□ -1.21
SLIT3-204ENST00000518140 SPRR2DP22532 72 aa7.43□□□□□ -1.22
SLIT3-204ENST00000518140 NEBP20929 6669 aa7.36□□□□□ -1.23
SLIT3-204ENST00000518140 LCE3BQ5TA77 95 aa7.14□□□□□ -1.27
SLIT3-204ENST00000518140 KRTAP5-5Q701N2 237 aaPredicted RBP7.14□□□□□ -1.27
SLIT3-204ENST00000518140 KRTAP6-1Q3LI64 71 aa7.03□□□□□ -1.28
SLIT3-204ENST00000518140 MT1AP04731 61 aa6.99□□□□□ -1.29
SLIT3-204ENST00000518140 SYNE1Q8NF91 8797 aaKnown RBP6.85□□□□□ -1.31
SLIT3-204ENST00000518140 KRTAP5-4Q6L8H1 288 aa6.73□□□□□ -1.33
SLIT3-204ENST00000518140 KRTAP2-2Q9BYT5 123 aa6.67□□□□□ -1.34
SLIT3-204ENST00000518140 KRTAP9-4Q9BYQ2 154 aa6.66□□□□□ -1.34
SLIT3-204ENST00000518140 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.35
SLIT3-204ENST00000518140 KRTAP12-4P60329 112 aa6.62□□□□□ -1.35
SLIT3-204ENST00000518140 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
SLIT3-204ENST00000518140 MT4P47944 62 aa6.53□□□□□ -1.36
SLIT3-204ENST00000518140 KRTAP4-6Q9BYQ5 205 aa6.53□□□□□ -1.36
SLIT3-204ENST00000518140 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
SLIT3-204ENST00000518140 KRTAP6-2Q3LI66 62 aa6.45□□□□□ -1.38
SLIT3-204ENST00000518140 LCE1DQ5T752 114 aa6.37□□□□□ -1.39
SLIT3-204ENST00000518140 HMCN1Q96RW7 5635 aa6.33□□□□□ -1.4
SLIT3-204ENST00000518140 KRTAP20-2Q3LI61 65 aa6.32□□□□□ -1.4
SLIT3-204ENST00000518140 MT3P25713 68 aa6.32□□□□□ -1.4
SLIT3-204ENST00000518140 LCE3DQ9BYE3 92 aa6.2□□□□□ -1.42
SLIT3-204ENST00000518140 LCE3EQ5T5B0 92 aa6.14□□□□□ -1.43
SLIT3-204ENST00000518140 KRTAP5-2Q701N4 177 aa6.13□□□□□ -1.43
SLIT3-204ENST00000518140 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
SLIT3-204ENST00000518140 OBSCNQ5VST9 7968 aa6.08□□□□□ -1.44
SLIT3-204ENST00000518140 PRM1P04553 51 aa5.85□□□□□ -1.47
SLIT3-204ENST00000518140 AHNAK2Q8IVF2 5795 aa5.53□□□□□ -1.52
SLIT3-204ENST00000518140 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
SLIT3-204ENST00000518140 LCE1EQ5T753 118 aa5.42□□□□□ -1.54
SLIT3-204ENST00000518140 KRTAP5-1Q6L8H4 278 aa5.33□□□□□ -1.56
SLIT3-204ENST00000518140 KRTAP5-8O75690 187 aa5.26□□□□□ -1.57
SLIT3-204ENST00000518140 LCE1BQ5T7P3 118 aa5.22□□□□□ -1.57
SLIT3-204ENST00000518140 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
SLIT3-204ENST00000518140 KRTAP5-10Q6L8G5 202 aa5.19□□□□□ -1.58
SLIT3-204ENST00000518140 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
SLIT3-204ENST00000518140 LCE1CQ5T751 118 aa5.08□□□□□ -1.6
SLIT3-204ENST00000518140 KRTAP5-7Q6L8G8 165 aa5.04□□□□□ -1.6
SLIT3-204ENST00000518140 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
SLIT3-204ENST00000518140 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.74□□□□□ -1.65
SLIT3-204ENST00000518140 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.66
SLIT3-204ENST00000518140 MUC5BQ9HC84 5762 aaPredicted RBP4.6□□□□□ -1.67
SLIT3-204ENST00000518140 KRTAP21-2Q3LI59 83 aa4.59□□□□□ -1.67
SLIT3-204ENST00000518140 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
SLIT3-204ENST00000518140 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
SLIT3-204ENST00000518140 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
SLIT3-204ENST00000518140 AHNAKQ09666 5890 aaKnown RBP4.09□□□□□ -1.75
SLIT3-204ENST00000518140 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
SLIT3-204ENST00000518140 PHGR1C9JFL3 82 aa3.86□□□□□ -1.79
SLIT3-204ENST00000518140 KRTAP21-1Q3LI58 79 aa3.73□□□□□ -1.81
SLIT3-204ENST00000518140 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
SLIT3-204ENST00000518140 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms