RNA–Protein interactions for RNA: ENST00000517992.1

SNTB1-202, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTB1, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-202ENST00000517992 KRTAP9-6A8MVA2 160 aa8.75□□□□□ -1.01
SNTB1-202ENST00000517992 SYNE2Q8WXH0 6885 aaKnown RBP8.75□□□□□ -1.01
SNTB1-202ENST00000517992 MT1EP04732 61 aa8.69□□□□□ -1.02
SNTB1-202ENST00000517992 MT1LQ93083 61 aa8.68□□□□□ -1.02
SNTB1-202ENST00000517992 KRTAP4-7Q9BYR0 210 aa8.59□□□□□ -1.03
SNTB1-202ENST00000517992 KRTAP2-3P0C7H8 128 aa8.55□□□□□ -1.04
SNTB1-202ENST00000517992 KRTAP2-4Q9BYR9 128 aa8.55□□□□□ -1.04
SNTB1-202ENST00000517992 KRTAP2-1Q9BYU5 128 aa8.55□□□□□ -1.04
SNTB1-202ENST00000517992 SPRR2FQ96RM1 72 aa8.4□□□□□ -1.06
SNTB1-202ENST00000517992 KRTAP9-7A8MTY7 169 aa8.39□□□□□ -1.07
SNTB1-202ENST00000517992 MUC12Q9UKN1 5478 aa8.39□□□□□ -1.07
SNTB1-202ENST00000517992 KRTAP6-3Q3LI67 103 aa8.38□□□□□ -1.07
SNTB1-202ENST00000517992 KRTAP5-9P26371 169 aa8.37□□□□□ -1.07
SNTB1-202ENST00000517992 MDN1Q9NU22 5596 aa8.22□□□□□ -1.09
SNTB1-202ENST00000517992 KRTAP19-3Q7Z4W3 81 aa8.14□□□□□ -1.11
SNTB1-202ENST00000517992 MT1GP13640 62 aa8.13□□□□□ -1.11
SNTB1-202ENST00000517992 MT1MQ8N339 61 aa8.12□□□□□ -1.11
SNTB1-202ENST00000517992 LCE1AQ5T7P2 110 aa8.07□□□□□ -1.12
SNTB1-202ENST00000517992 KRTAP4-3Q9BYR4 195 aa8.06□□□□□ -1.12
SNTB1-202ENST00000517992 SPRR2EP22531 72 aa8.05□□□□□ -1.12
SNTB1-202ENST00000517992 SPRR2BP35325 72 aa8.05□□□□□ -1.12
SNTB1-202ENST00000517992 SPRR2AP35326 72 aa8.05□□□□□ -1.12
SNTB1-202ENST00000517992 LOC100996750A0A140TA64 210 aa8.01□□□□□ -1.13
SNTB1-202ENST00000517992 NEBP20929 6669 aa7.94□□□□□ -1.14
SNTB1-202ENST00000517992 LCE5AQ5TCM9 118 aa7.91□□□□□ -1.14
SNTB1-202ENST00000517992 SPRR2DP22532 72 aa7.76□□□□□ -1.17
SNTB1-202ENST00000517992 DSTQ03001 7570 aaKnown RBP7.69□□□□□ -1.18
SNTB1-202ENST00000517992 KRTAP2-2Q9BYT5 123 aa7.53□□□□□ -1.2
SNTB1-202ENST00000517992 LCE3BQ5TA77 95 aa7.48□□□□□ -1.21
SNTB1-202ENST00000517992 KRTAP12-4P60329 112 aa7.45□□□□□ -1.22
SNTB1-202ENST00000517992 KRTAP20-1Q3LI63 56 aa7.39□□□□□ -1.23
SNTB1-202ENST00000517992 MT1AP04731 61 aa7.35□□□□□ -1.23
SNTB1-202ENST00000517992 KRTAP6-1Q3LI64 71 aa7.31□□□□□ -1.24
SNTB1-202ENST00000517992 KRTAP5-5Q701N2 237 aaPredicted RBP7.22□□□□□ -1.25
SNTB1-202ENST00000517992 KRTAP4-9Q9BYQ8 210 aa7.15□□□□□ -1.26
SNTB1-202ENST00000517992 LCE3DQ9BYE3 92 aa7.04□□□□□ -1.28
SNTB1-202ENST00000517992 SYNE1Q8NF91 8797 aaKnown RBP6.96□□□□□ -1.29
SNTB1-202ENST00000517992 LCE3EQ5T5B0 92 aa6.96□□□□□ -1.3
SNTB1-202ENST00000517992 KRTAP5-4Q6L8H1 288 aa6.9□□□□□ -1.3
SNTB1-202ENST00000517992 KRTAP9-4Q9BYQ2 154 aa6.88□□□□□ -1.31
SNTB1-202ENST00000517992 LCE4AQ5TA78 99 aa6.82□□□□□ -1.32
SNTB1-202ENST00000517992 MT4P47944 62 aa6.79□□□□□ -1.32
SNTB1-202ENST00000517992 LCE1DQ5T752 114 aa6.72□□□□□ -1.33
SNTB1-202ENST00000517992 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
SNTB1-202ENST00000517992 HMCN1Q96RW7 5635 aa6.66□□□□□ -1.34
SNTB1-202ENST00000517992 LCE1EQ5T753 118 aa6.63□□□□□ -1.35
SNTB1-202ENST00000517992 MT3P25713 68 aa6.59□□□□□ -1.36
SNTB1-202ENST00000517992 PRM1P04553 51 aa6.57□□□□□ -1.36
SNTB1-202ENST00000517992 KRTAP6-2Q3LI66 62 aa6.55□□□□□ -1.36
SNTB1-202ENST00000517992 KRTAP20-2Q3LI61 65 aa6.5□□□□□ -1.37
SNTB1-202ENST00000517992 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
SNTB1-202ENST00000517992 KRTAP5-2Q701N4 177 aa6.2□□□□□ -1.42
SNTB1-202ENST00000517992 LCE1FQ5T754 118 aa6.13□□□□□ -1.43
SNTB1-202ENST00000517992 AHNAK2Q8IVF2 5795 aa6.02□□□□□ -1.45
SNTB1-202ENST00000517992 OBSCNQ5VST9 7968 aa6.02□□□□□ -1.45
SNTB1-202ENST00000517992 KRTAP5-10Q6L8G5 202 aa5.77□□□□□ -1.49
SNTB1-202ENST00000517992 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
SNTB1-202ENST00000517992 GPR98Q8WXG9 6306 aa5.71□□□□□ -1.5
SNTB1-202ENST00000517992 KRTAP5-8O75690 187 aa5.52□□□□□ -1.53
SNTB1-202ENST00000517992 KRTAP9-9Q9BYP9 154 aa5.46□□□□□ -1.53
SNTB1-202ENST00000517992 MUC5ACP98088 5654 aa5.45□□□□□ -1.54
SNTB1-202ENST00000517992 KRTAP5-1Q6L8H4 278 aa5.45□□□□□ -1.54
SNTB1-202ENST00000517992 KRTAP5-7Q6L8G8 165 aa5.37□□□□□ -1.55
SNTB1-202ENST00000517992 LCE1BQ5T7P3 118 aa5.18□□□□□ -1.58
SNTB1-202ENST00000517992 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
SNTB1-202ENST00000517992 LCE1CQ5T751 118 aa5.12□□□□□ -1.59
SNTB1-202ENST00000517992 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
SNTB1-202ENST00000517992 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
SNTB1-202ENST00000517992 KRTAP21-2Q3LI59 83 aa4.76□□□□□ -1.65
SNTB1-202ENST00000517992 AHNAKQ09666 5890 aaKnown RBP4.63□□□□□ -1.67
SNTB1-202ENST00000517992 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
SNTB1-202ENST00000517992 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
SNTB1-202ENST00000517992 KRTAP21-1Q3LI58 79 aa4.37□□□□□ -1.71
SNTB1-202ENST00000517992 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
SNTB1-202ENST00000517992 MUC19Q7Z5P9 8384 aa4.12□□□□□ -1.75
SNTB1-202ENST00000517992 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
SNTB1-202ENST00000517992 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms