RNA–Protein interactions for RNA: ENST00000517924.5

LAPTM4B-202, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 5

Gene LAPTM4B, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-202ENST00000517924 LCE1DQ5T752 114 aa8.56□□□□□ -1.04
LAPTM4B-202ENST00000517924 UQCR11O14957 56 aa8.53□□□□□ -1.04
LAPTM4B-202ENST00000517924 MT4P47944 62 aa8.46□□□□□ -1.06
LAPTM4B-202ENST00000517924 LCE4AQ5TA78 99 aa8.46□□□□□ -1.06
LAPTM4B-202ENST00000517924 KRTAP12-3P60328 96 aa8.44□□□□□ -1.06
LAPTM4B-202ENST00000517924 KRTAP4-7Q9BYR0 210 aa8.44□□□□□ -1.06
LAPTM4B-202ENST00000517924 GPR98Q8WXG9 6306 aa8.42□□□□□ -1.06
LAPTM4B-202ENST00000517924 MIR22HGQ0VDD5 57 aa8.36□□□□□ -1.07
LAPTM4B-202ENST00000517924 KRTAP5-4Q6L8H1 288 aa8.36□□□□□ -1.07
LAPTM4B-202ENST00000517924 HMCN1Q96RW7 5635 aa8.33□□□□□ -1.08
LAPTM4B-202ENST00000517924 KRTAP25-1Q3LHN0 102 aa8.24□□□□□ -1.09
LAPTM4B-202ENST00000517924 KRTAP4-6Q9BYQ5 205 aa8.24□□□□□ -1.09
LAPTM4B-202ENST00000517924 PSPHP1O15172 72 aa8.23□□□□□ -1.09
LAPTM4B-202ENST00000517924 K7ERS5 55 aa8.13□□□□□ -1.11
LAPTM4B-202ENST00000517924 Q1T7F1 81 aa8.12□□□□□ -1.11
LAPTM4B-202ENST00000517924 V9GYY9 64 aa8.11□□□□□ -1.11
LAPTM4B-202ENST00000517924 AHNAK2Q8IVF2 5795 aa8.04□□□□□ -1.12
LAPTM4B-202ENST00000517924 KRTAP5-5Q701N2 237 aaPredicted RBP8.04□□□□□ -1.12
LAPTM4B-202ENST00000517924 LOC100996750A0A140TA64 210 aa7.99□□□□□ -1.13
LAPTM4B-202ENST00000517924 KRTAP5-10Q6L8G5 202 aa7.95□□□□□ -1.14
LAPTM4B-202ENST00000517924 KRTAP20-2Q3LI61 65 aa7.9□□□□□ -1.14
LAPTM4B-202ENST00000517924 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
LAPTM4B-202ENST00000517924 A6NED7 52 aa7.89□□□□□ -1.15
LAPTM4B-202ENST00000517924 KRTAP15-1Q3LI76 137 aa7.87□□□□□ -1.15
LAPTM4B-202ENST00000517924 KRTAP19-4Q3LI73 84 aa7.82□□□□□ -1.16
LAPTM4B-202ENST00000517924 SPRR5A0A1B0GTR4 108 aa7.8□□□□□ -1.16
LAPTM4B-202ENST00000517924 LCE3CQ5T5A8 94 aa7.78□□□□□ -1.16
LAPTM4B-202ENST00000517924 KRTAP12-4P60329 112 aa7.77□□□□□ -1.17
LAPTM4B-202ENST00000517924 KRTAP5-3Q6L8H2 238 aa7.76□□□□□ -1.17
LAPTM4B-202ENST00000517924 CDC42SE1Q9NRR8 79 aa7.74□□□□□ -1.17
LAPTM4B-202ENST00000517924 ROMO1P60602 79 aa7.64□□□□□ -1.19
LAPTM4B-202ENST00000517924 KRTAP5-7Q6L8G8 165 aa7.62□□□□□ -1.19
LAPTM4B-202ENST00000517924 SYNE1Q8NF91 8797 aaKnown RBP7.6□□□□□ -1.19
LAPTM4B-202ENST00000517924 RPS28P62857 69 aaKnown RBP7.59□□□□□ -1.19
LAPTM4B-202ENST00000517924 KRTAP6-1Q3LI64 71 aa7.47□□□□□ -1.21
LAPTM4B-202ENST00000517924 MT1AP04731 61 aa7.45□□□□□ -1.22
LAPTM4B-202ENST00000517924 PCP4P48539 62 aa7.45□□□□□ -1.22
LAPTM4B-202ENST00000517924 KRTAP9-6A8MVA2 160 aa7.43□□□□□ -1.22
LAPTM4B-202ENST00000517924 KRTAP5-2Q701N4 177 aa7.32□□□□□ -1.24
LAPTM4B-202ENST00000517924 KRTAP9-4Q9BYQ2 154 aa7.22□□□□□ -1.25
LAPTM4B-202ENST00000517924 KRTAP4-11Q9BYQ6 195 aa7.21□□□□□ -1.26
LAPTM4B-202ENST00000517924 KRTAP6-2Q3LI66 62 aa7.12□□□□□ -1.27
LAPTM4B-202ENST00000517924 KRTAP5-8O75690 187 aa6.98□□□□□ -1.29
LAPTM4B-202ENST00000517924 OBSCNQ5VST9 7968 aa6.83□□□□□ -1.32
LAPTM4B-202ENST00000517924 MT3P25713 68 aa6.78□□□□□ -1.32
LAPTM4B-202ENST00000517924 BRK1Q8WUW1 75 aa6.69□□□□□ -1.34
LAPTM4B-202ENST00000517924 KRTAP5-1Q6L8H4 278 aa6.59□□□□□ -1.35
LAPTM4B-202ENST00000517924 MUC5ACP98088 5654 aa6.59□□□□□ -1.36
LAPTM4B-202ENST00000517924 KRTAP9-9Q9BYP9 154 aa6.58□□□□□ -1.36
LAPTM4B-202ENST00000517924 MUC5BQ9HC84 5762 aaPredicted RBP6.57□□□□□ -1.36
LAPTM4B-202ENST00000517924 AHNAKQ09666 5890 aaKnown RBP6.53□□□□□ -1.36
LAPTM4B-202ENST00000517924 H3BS24 57 aa6.5□□□□□ -1.37
LAPTM4B-202ENST00000517924 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
LAPTM4B-202ENST00000517924 LCE1EQ5T753 118 aa6.22□□□□□ -1.41
LAPTM4B-202ENST00000517924 PRAC1Q96KF2 57 aa6.17□□□□□ -1.42
LAPTM4B-202ENST00000517924 KRTAP4-2Q9BYR5 136 aa5.96□□□□□ -1.46
LAPTM4B-202ENST00000517924 LCE1BQ5T7P3 118 aa5.94□□□□□ -1.46
LAPTM4B-202ENST00000517924 LCE1CQ5T751 118 aa5.79□□□□□ -1.48
LAPTM4B-202ENST00000517924 PRO0628Q9UI54 55 aa5.65□□□□□ -1.5
LAPTM4B-202ENST00000517924 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
LAPTM4B-202ENST00000517924 KRTAP4-12Q9BQ66 201 aa5.51□□□□□ -1.53
LAPTM4B-202ENST00000517924 KTN1-AS1Q86SY8 53 aa5.45□□□□□ -1.54
LAPTM4B-202ENST00000517924 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
LAPTM4B-202ENST00000517924 KRTAP5-11Q6L8G4 156 aa5.26□□□□□ -1.57
LAPTM4B-202ENST00000517924 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.26□□□□□ -1.57
LAPTM4B-202ENST00000517924 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
LAPTM4B-202ENST00000517924 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
LAPTM4B-202ENST00000517924 LCE1FQ5T754 118 aa5.07□□□□□ -1.6
LAPTM4B-202ENST00000517924 KRTAP21-2Q3LI59 83 aa4.9□□□□□ -1.63
LAPTM4B-202ENST00000517924 PHGR1C9JFL3 82 aa4.62□□□□□ -1.67
LAPTM4B-202ENST00000517924 A0A0A0MQY5 61 aa4.59□□□□□ -1.67
LAPTM4B-202ENST00000517924 KRTAP4-4Q9BYR3 166 aa4.56□□□□□ -1.68
LAPTM4B-202ENST00000517924 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
LAPTM4B-202ENST00000517924 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
LAPTM4B-202ENST00000517924 PRM1P04553 51 aa3.95□□□□□ -1.78
LAPTM4B-202ENST00000517924 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
LAPTM4B-202ENST00000517924 INE1O15225 51 aa3.07□□□□□ -1.92
LAPTM4B-202ENST00000517924 MUC16Q8WXI7 14507 aa3.01□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 512.1 ms