RNA–Protein interactions for RNA: ENST00000517619.5

SPIDR-202, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3

Gene SPIDR, Length 335 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-202ENST00000517619 TNP1P09430 55 aa3.28□□□□□ -1.88
SPIDR-202ENST00000517619 A0A1B0GU69 56 aa3.26□□□□□ -1.89
SPIDR-202ENST00000517619 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
SPIDR-202ENST00000517619 H7BZZ5 65 aa3.24□□□□□ -1.89
SPIDR-202ENST00000517619 COX7CP15954 63 aa3.24□□□□□ -1.89
SPIDR-202ENST00000517619 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
SPIDR-202ENST00000517619 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
SPIDR-202ENST00000517619 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
SPIDR-202ENST00000517619 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
SPIDR-202ENST00000517619 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
SPIDR-202ENST00000517619 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
SPIDR-202ENST00000517619 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
SPIDR-202ENST00000517619 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
SPIDR-202ENST00000517619 LOC100996750A0A140TA64 210 aa3.08□□□□□ -1.92
SPIDR-202ENST00000517619 ANAPC13Q9BS18 74 aa3.04□□□□□ -1.92
SPIDR-202ENST00000517619 LINC01558Q9Y6Z2 57 aa3.03□□□□□ -1.92
SPIDR-202ENST00000517619 CCDC179H3BU77 68 aa3□□□□□ -1.93
SPIDR-202ENST00000517619 UQCR11O14957 56 aa3□□□□□ -1.93
SPIDR-202ENST00000517619 ATP5EP56381 51 aaPredicted RBP3□□□□□ -1.93
SPIDR-202ENST00000517619 KRTAP25-1Q3LHN0 102 aa3□□□□□ -1.93
SPIDR-202ENST00000517619 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
SPIDR-202ENST00000517619 MIR22HGQ0VDD5 57 aa2.92□□□□□ -1.94
SPIDR-202ENST00000517619 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
SPIDR-202ENST00000517619 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
SPIDR-202ENST00000517619 KRTAP15-1Q3LI76 137 aa2.91□□□□□ -1.94
SPIDR-202ENST00000517619 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
SPIDR-202ENST00000517619 K7ERS5 55 aa2.89□□□□□ -1.95
SPIDR-202ENST00000517619 MT1AP04731 61 aa2.88□□□□□ -1.95
SPIDR-202ENST00000517619 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
SPIDR-202ENST00000517619 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
SPIDR-202ENST00000517619 KRTAP23-1A1A580 65 aa2.86□□□□□ -1.95
SPIDR-202ENST00000517619 TMEM258P61165 79 aa2.86□□□□□ -1.95
SPIDR-202ENST00000517619 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
SPIDR-202ENST00000517619 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.96
SPIDR-202ENST00000517619 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
SPIDR-202ENST00000517619 PSPHP1O15172 72 aa2.79□□□□□ -1.96
SPIDR-202ENST00000517619 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
SPIDR-202ENST00000517619 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
SPIDR-202ENST00000517619 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
SPIDR-202ENST00000517619 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
SPIDR-202ENST00000517619 CDC42SE1Q9NRR8 79 aa2.73□□□□□ -1.97
SPIDR-202ENST00000517619 V9GYY9 64 aa2.73□□□□□ -1.97
SPIDR-202ENST00000517619 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
SPIDR-202ENST00000517619 RPS28P62857 69 aaKnown RBP2.71□□□□□ -1.98
SPIDR-202ENST00000517619 Q1T7F1 81 aa2.71□□□□□ -1.98
SPIDR-202ENST00000517619 A6NED7 52 aa2.68□□□□□ -1.98
SPIDR-202ENST00000517619 ROMO1P60602 79 aa2.66□□□□□ -1.98
SPIDR-202ENST00000517619 MT3P25713 68 aa2.63□□□□□ -1.99
SPIDR-202ENST00000517619 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
SPIDR-202ENST00000517619 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
SPIDR-202ENST00000517619 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
SPIDR-202ENST00000517619 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.03
SPIDR-202ENST00000517619 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
SPIDR-202ENST00000517619 PCP4P48539 62 aa2.25□□□□□ -2.05
SPIDR-202ENST00000517619 KRTAP4-12Q9BQ66 201 aa2.2□□□□□ -2.06
SPIDR-202ENST00000517619 BRK1Q8WUW1 75 aa2.1□□□□□ -2.07
SPIDR-202ENST00000517619 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
SPIDR-202ENST00000517619 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
SPIDR-202ENST00000517619 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
SPIDR-202ENST00000517619 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
SPIDR-202ENST00000517619 PHGR1C9JFL3 82 aa2□□□□□ -2.09
SPIDR-202ENST00000517619 PMAIP1Q13794 54 aa1.95□□□□□ -2.1
SPIDR-202ENST00000517619 PRAC1Q96KF2 57 aa1.94□□□□□ -2.1
SPIDR-202ENST00000517619 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
SPIDR-202ENST00000517619 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
SPIDR-202ENST00000517619 PRO0628Q9UI54 55 aa1.87□□□□□ -2.11
SPIDR-202ENST00000517619 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
SPIDR-202ENST00000517619 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
SPIDR-202ENST00000517619 KTN1-AS1Q86SY8 53 aa1.73□□□□□ -2.13
SPIDR-202ENST00000517619 LUZP6Q538Z0 58 aa1.66□□□□□ -2.14
SPIDR-202ENST00000517619 SVIPQ8NHG7 77 aa1.63□□□□□ -2.15
SPIDR-202ENST00000517619 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
SPIDR-202ENST00000517619 PRM1P04553 51 aa1.37□□□□□ -2.19
SPIDR-202ENST00000517619 NDUFAF8A1L188 74 aa1.28□□□□□ -2.2
SPIDR-202ENST00000517619 A0A0A0MQY5 61 aa1.25□□□□□ -2.21
SPIDR-202ENST00000517619 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
SPIDR-202ENST00000517619 INE1O15225 51 aa1.18□□□□□ -2.22
SPIDR-202ENST00000517619 H3BS24 57 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 226 ms