RNA–Protein interactions for RNA: ENST00000517315.1

NSMCE2-202, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3 BASIC

Gene NSMCE2, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-202ENST00000517315 PLAC4Q8WY50 150 aa2.54□□□□□ -2
NSMCE2-202ENST00000517315 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
NSMCE2-202ENST00000517315 KRTAP19-8Q3LI54 63 aa2.53□□□□□ -2
NSMCE2-202ENST00000517315 SPINT4Q6UDR6 99 aa2.51□□□□□ -2.01
NSMCE2-202ENST00000517315 A6NN06 94 aa2.5□□□□□ -2.01
NSMCE2-202ENST00000517315 MT1BP07438 61 aa2.5□□□□□ -2.01
NSMCE2-202ENST00000517315 K7ERS5 55 aa2.48□□□□□ -2.01
NSMCE2-202ENST00000517315 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
NSMCE2-202ENST00000517315 CAMK2N1Q7Z7J9 78 aa2.47□□□□□ -2.01
NSMCE2-202ENST00000517315 CDC42SE1Q9NRR8 79 aa2.47□□□□□ -2.01
NSMCE2-202ENST00000517315 PP632Q6XCG6 107 aa2.46□□□□□ -2.02
NSMCE2-202ENST00000517315 USH2AO75445 5202 aa2.46□□□□□ -2.02
NSMCE2-202ENST00000517315 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
NSMCE2-202ENST00000517315 PRO2289Q9P1D8 64 aa2.43□□□□□ -2.02
NSMCE2-202ENST00000517315 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
NSMCE2-202ENST00000517315 KRTAP19-6Q3LI70 58 aa2.42□□□□□ -2.02
NSMCE2-202ENST00000517315 FSIP2Q5CZC0 6907 aa2.41□□□□□ -2.02
NSMCE2-202ENST00000517315 MT1XP80297 61 aa2.4□□□□□ -2.03
NSMCE2-202ENST00000517315 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
NSMCE2-202ENST00000517315 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
NSMCE2-202ENST00000517315 ROMO1P60602 79 aa2.33□□□□□ -2.04
NSMCE2-202ENST00000517315 TNP1P09430 55 aa2.32□□□□□ -2.04
NSMCE2-202ENST00000517315 PMAIP1Q13794 54 aa2.32□□□□□ -2.04
NSMCE2-202ENST00000517315 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
NSMCE2-202ENST00000517315 PRO0628Q9UI54 55 aa2.31□□□□□ -2.04
NSMCE2-202ENST00000517315 KRTAP25-1Q3LHN0 102 aa2.29□□□□□ -2.04
NSMCE2-202ENST00000517315 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
NSMCE2-202ENST00000517315 KRTAP8-1Q8IUC2 63 aa2.23□□□□□ -2.05
NSMCE2-202ENST00000517315 MACF1Q9UPN3 7388 aaKnown RBP2.19□□□□□ -2.06
NSMCE2-202ENST00000517315 KMT2DO14686 5537 aa2.17□□□□□ -2.06
NSMCE2-202ENST00000517315 SYNE2Q8WXH0 6885 aaKnown RBP2.17□□□□□ -2.06
NSMCE2-202ENST00000517315 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
NSMCE2-202ENST00000517315 SPRR2FQ96RM1 72 aa2.17□□□□□ -2.06
NSMCE2-202ENST00000517315 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
NSMCE2-202ENST00000517315 KTN1-AS1Q86SY8 53 aa2.16□□□□□ -2.06
NSMCE2-202ENST00000517315 LUZP6Q538Z0 58 aa2.15□□□□□ -2.07
NSMCE2-202ENST00000517315 KRTAP12-3P60328 96 aa2.14□□□□□ -2.07
NSMCE2-202ENST00000517315 KRTAP19-7Q3SYF9 63 aa2.13□□□□□ -2.07
NSMCE2-202ENST00000517315 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
NSMCE2-202ENST00000517315 MT1EP04732 61 aa2.11□□□□□ -2.07
NSMCE2-202ENST00000517315 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
NSMCE2-202ENST00000517315 SPRR2EP22531 72 aa2.09□□□□□ -2.07
NSMCE2-202ENST00000517315 SPRR2BP35325 72 aa2.09□□□□□ -2.07
NSMCE2-202ENST00000517315 SPRR2AP35326 72 aa2.09□□□□□ -2.07
NSMCE2-202ENST00000517315 KRTAP19-3Q7Z4W3 81 aa2.06□□□□□ -2.08
NSMCE2-202ENST00000517315 MT1LQ93083 61 aa2.06□□□□□ -2.08
NSMCE2-202ENST00000517315 MT1GP13640 62 aa2.04□□□□□ -2.08
NSMCE2-202ENST00000517315 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
NSMCE2-202ENST00000517315 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
NSMCE2-202ENST00000517315 SPRR2DP22532 72 aa2.02□□□□□ -2.09
NSMCE2-202ENST00000517315 NEBP20929 6669 aa2.02□□□□□ -2.09
NSMCE2-202ENST00000517315 MT1MQ8N339 61 aa2□□□□□ -2.09
NSMCE2-202ENST00000517315 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
NSMCE2-202ENST00000517315 KRTAP2-3P0C7H8 128 aa1.94□□□□□ -2.1
NSMCE2-202ENST00000517315 KRTAP2-4Q9BYR9 128 aa1.94□□□□□ -2.1
NSMCE2-202ENST00000517315 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
NSMCE2-202ENST00000517315 KRTAP2-1Q9BYU5 128 aa1.88□□□□□ -2.11
NSMCE2-202ENST00000517315 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
NSMCE2-202ENST00000517315 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
NSMCE2-202ENST00000517315 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
NSMCE2-202ENST00000517315 MT1AP04731 61 aa1.75□□□□□ -2.13
NSMCE2-202ENST00000517315 MT4P47944 62 aa1.75□□□□□ -2.13
NSMCE2-202ENST00000517315 KRTAP6-1Q3LI64 71 aa1.73□□□□□ -2.13
NSMCE2-202ENST00000517315 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
NSMCE2-202ENST00000517315 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
NSMCE2-202ENST00000517315 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
NSMCE2-202ENST00000517315 GPR98Q8WXG9 6306 aa1.58□□□□□ -2.16
NSMCE2-202ENST00000517315 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
NSMCE2-202ENST00000517315 KRTAP5-10Q6L8G5 202 aa1.47□□□□□ -2.17
NSMCE2-202ENST00000517315 INE1O15225 51 aa1.38□□□□□ -2.19
NSMCE2-202ENST00000517315 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
NSMCE2-202ENST00000517315 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
NSMCE2-202ENST00000517315 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
NSMCE2-202ENST00000517315 PRM1P04553 51 aa1.2□□□□□ -2.22
NSMCE2-202ENST00000517315 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
NSMCE2-202ENST00000517315 PHGR1C9JFL3 82 aa1□□□□□ -2.25
NSMCE2-202ENST00000517315 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 67.7 ms