RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 MT1GP13640 62 aa1.96□□□□□ -2.1
SCARNA16.4-201ENST00000516956 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
SCARNA16.4-201ENST00000516956 KRTAP15-1Q3LI76 137 aa1.94□□□□□ -2.1
SCARNA16.4-201ENST00000516956 MT1LQ93083 61 aa1.94□□□□□ -2.1
SCARNA16.4-201ENST00000516956 KRTAP2-3P0C7H8 128 aa1.93□□□□□ -2.1
SCARNA16.4-201ENST00000516956 KRTAP19-4Q3LI73 84 aa1.93□□□□□ -2.1
SCARNA16.4-201ENST00000516956 KRTAP2-4Q9BYR9 128 aa1.93□□□□□ -2.1
SCARNA16.4-201ENST00000516956 LCE5AQ5TCM9 118 aa1.92□□□□□ -2.1
SCARNA16.4-201ENST00000516956 NEBP20929 6669 aa1.91□□□□□ -2.1
SCARNA16.4-201ENST00000516956 LCE3BQ5TA77 95 aa1.9□□□□□ -2.11
SCARNA16.4-201ENST00000516956 KTN1-AS1Q86SY8 53 aa1.9□□□□□ -2.11
SCARNA16.4-201ENST00000516956 MDN1Q9NU22 5596 aa1.9□□□□□ -2.11
SCARNA16.4-201ENST00000516956 MT1MQ8N339 61 aa1.89□□□□□ -2.11
SCARNA16.4-201ENST00000516956 PRAC1Q96KF2 57 aa1.89□□□□□ -2.11
SCARNA16.4-201ENST00000516956 MUC12Q9UKN1 5478 aa1.89□□□□□ -2.11
SCARNA16.4-201ENST00000516956 KRTAP2-2Q9BYT5 123 aa1.88□□□□□ -2.11
SCARNA16.4-201ENST00000516956 KRTAP2-1Q9BYU5 128 aa1.88□□□□□ -2.11
SCARNA16.4-201ENST00000516956 SVIPQ8NHG7 77 aa1.87□□□□□ -2.11
SCARNA16.4-201ENST00000516956 LCE3CQ5T5A8 94 aa1.86□□□□□ -2.11
SCARNA16.4-201ENST00000516956 KRTAP4-7Q9BYR0 210 aa1.83□□□□□ -2.12
SCARNA16.4-201ENST00000516956 KRTAP4-3Q9BYR4 195 aa1.82□□□□□ -2.12
SCARNA16.4-201ENST00000516956 LCE4AQ5TA78 99 aa1.76□□□□□ -2.13
SCARNA16.4-201ENST00000516956 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
SCARNA16.4-201ENST00000516956 LOC100996750A0A140TA64 210 aa1.72□□□□□ -2.13
SCARNA16.4-201ENST00000516956 MT4P47944 62 aa1.71□□□□□ -2.14
SCARNA16.4-201ENST00000516956 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
SCARNA16.4-201ENST00000516956 KRTAP4-9Q9BYQ8 210 aa1.71□□□□□ -2.14
SCARNA16.4-201ENST00000516956 LUZP6Q538Z0 58 aa1.69□□□□□ -2.14
SCARNA16.4-201ENST00000516956 LCE1DQ5T752 114 aa1.68□□□□□ -2.14
SCARNA16.4-201ENST00000516956 KRTAP5-4Q6L8H1 288 aa1.68□□□□□ -2.14
SCARNA16.4-201ENST00000516956 KRTAP9-6A8MVA2 160 aa1.67□□□□□ -2.14
SCARNA16.4-201ENST00000516956 KRTAP5-5Q701N2 237 aaPredicted RBP1.67□□□□□ -2.14
SCARNA16.4-201ENST00000516956 MT1AP04731 61 aa1.66□□□□□ -2.14
SCARNA16.4-201ENST00000516956 SPRR5A0A1B0GTR4 108 aa1.64□□□□□ -2.15
SCARNA16.4-201ENST00000516956 KRTAP4-6Q9BYQ5 205 aa1.63□□□□□ -2.15
SCARNA16.4-201ENST00000516956 KRTAP6-1Q3LI64 71 aa1.62□□□□□ -2.15
SCARNA16.4-201ENST00000516956 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
SCARNA16.4-201ENST00000516956 KRTAP9-4Q9BYQ2 154 aa1.59□□□□□ -2.15
SCARNA16.4-201ENST00000516956 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
SCARNA16.4-201ENST00000516956 MT3P25713 68 aa1.55□□□□□ -2.16
SCARNA16.4-201ENST00000516956 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
SCARNA16.4-201ENST00000516956 KRTAP6-2Q3LI66 62 aa1.54□□□□□ -2.16
SCARNA16.4-201ENST00000516956 KRTAP5-3Q6L8H2 238 aa1.52□□□□□ -2.17
SCARNA16.4-201ENST00000516956 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
SCARNA16.4-201ENST00000516956 GPR98Q8WXG9 6306 aa1.47□□□□□ -2.17
SCARNA16.4-201ENST00000516956 NDUFAF8A1L188 74 aa1.46□□□□□ -2.18
SCARNA16.4-201ENST00000516956 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
SCARNA16.4-201ENST00000516956 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
SCARNA16.4-201ENST00000516956 KRTAP4-11Q9BYQ6 195 aa1.44□□□□□ -2.18
SCARNA16.4-201ENST00000516956 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
SCARNA16.4-201ENST00000516956 LCE3DQ9BYE3 92 aa1.39□□□□□ -2.19
SCARNA16.4-201ENST00000516956 KRTAP5-8O75690 187 aa1.35□□□□□ -2.19
SCARNA16.4-201ENST00000516956 LCE1EQ5T753 118 aa1.35□□□□□ -2.19
SCARNA16.4-201ENST00000516956 LCE3EQ5T5B0 92 aa1.34□□□□□ -2.19
SCARNA16.4-201ENST00000516956 KRTAP9-9Q9BYP9 154 aa1.34□□□□□ -2.19
SCARNA16.4-201ENST00000516956 OBSCNQ5VST9 7968 aa1.32□□□□□ -2.2
SCARNA16.4-201ENST00000516956 A0A0A0MQY5 61 aa1.32□□□□□ -2.2
SCARNA16.4-201ENST00000516956 LCE1BQ5T7P3 118 aa1.31□□□□□ -2.2
SCARNA16.4-201ENST00000516956 KRTAP5-1Q6L8H4 278 aa1.31□□□□□ -2.2
SCARNA16.4-201ENST00000516956 LCE1CQ5T751 118 aa1.25□□□□□ -2.21
SCARNA16.4-201ENST00000516956 INE1O15225 51 aa1.23□□□□□ -2.21
SCARNA16.4-201ENST00000516956 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
SCARNA16.4-201ENST00000516956 H3BS24 57 aa1.22□□□□□ -2.21
SCARNA16.4-201ENST00000516956 KRTAP4-2Q9BYR5 136 aa1.22□□□□□ -2.21
SCARNA16.4-201ENST00000516956 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
SCARNA16.4-201ENST00000516956 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
SCARNA16.4-201ENST00000516956 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.13□□□□□ -2.23
SCARNA16.4-201ENST00000516956 KRTAP5-11Q6L8G4 156 aa1.11□□□□□ -2.23
SCARNA16.4-201ENST00000516956 KRTAP4-12Q9BQ66 201 aa1.09□□□□□ -2.23
SCARNA16.4-201ENST00000516956 PRM1P04553 51 aa1.08□□□□□ -2.24
SCARNA16.4-201ENST00000516956 LCE1FQ5T754 118 aa1.06□□□□□ -2.24
SCARNA16.4-201ENST00000516956 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
SCARNA16.4-201ENST00000516956 KRTAP4-4Q9BYR3 166 aa0.97□□□□□ -2.25
SCARNA16.4-201ENST00000516956 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
SCARNA16.4-201ENST00000516956 MUC19Q7Z5P9 8384 aa0.8□□□□□ -2.28
SCARNA16.4-201ENST00000516956 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
SCARNA16.4-201ENST00000516956 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 72.8 ms