RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-213ENST00000515859 MT1LQ93083 61 aa8.87□□□□□ -0.99
TUSC3-213ENST00000515859 KRTAP19-3Q7Z4W3 81 aa8.83□□□□□ -1
TUSC3-213ENST00000515859 MDN1Q9NU22 5596 aa8.83□□□□□ -1
TUSC3-213ENST00000515859 LCE1AQ5T7P2 110 aa8.82□□□□□ -1
TUSC3-213ENST00000515859 SPRR2EP22531 72 aa8.8□□□□□ -1
TUSC3-213ENST00000515859 SPRR2BP35325 72 aa8.8□□□□□ -1
TUSC3-213ENST00000515859 SPRR2AP35326 72 aa8.8□□□□□ -1
TUSC3-213ENST00000515859 KRTAP19-4Q3LI73 84 aa8.8□□□□□ -1
TUSC3-213ENST00000515859 MT1GP13640 62 aa8.76□□□□□ -1.01
TUSC3-213ENST00000515859 LCE5AQ5TCM9 118 aa8.72□□□□□ -1.01
TUSC3-213ENST00000515859 MT1MQ8N339 61 aa8.59□□□□□ -1.03
TUSC3-213ENST00000515859 NEBP20929 6669 aa8.59□□□□□ -1.03
TUSC3-213ENST00000515859 LCE3CQ5T5A8 94 aa8.58□□□□□ -1.04
TUSC3-213ENST00000515859 SPRR2DP22532 72 aa8.49□□□□□ -1.05
TUSC3-213ENST00000515859 KRTAP4-7Q9BYR0 210 aa8.47□□□□□ -1.05
TUSC3-213ENST00000515859 KRTAP4-3Q9BYR4 195 aa8.33□□□□□ -1.08
TUSC3-213ENST00000515859 SPRR5A0A1B0GTR4 108 aa8.22□□□□□ -1.09
TUSC3-213ENST00000515859 DSTQ03001 7570 aaKnown RBP8.2□□□□□ -1.1
TUSC3-213ENST00000515859 LCE3BQ5TA77 95 aa8.18□□□□□ -1.1
TUSC3-213ENST00000515859 KRTAP2-3P0C7H8 128 aa8.12□□□□□ -1.11
TUSC3-213ENST00000515859 KRTAP2-4Q9BYR9 128 aa8.12□□□□□ -1.11
TUSC3-213ENST00000515859 KRTAP20-1Q3LI63 56 aa8.05□□□□□ -1.12
TUSC3-213ENST00000515859 KRTAP9-6A8MVA2 160 aa8.04□□□□□ -1.12
TUSC3-213ENST00000515859 LOC100996750A0A140TA64 210 aa7.98□□□□□ -1.13
TUSC3-213ENST00000515859 KRTAP2-2Q9BYT5 123 aa7.94□□□□□ -1.14
TUSC3-213ENST00000515859 KRTAP2-1Q9BYU5 128 aa7.94□□□□□ -1.14
TUSC3-213ENST00000515859 LUZP6Q538Z0 58 aa7.83□□□□□ -1.16
TUSC3-213ENST00000515859 KRTAP5-5Q701N2 237 aaPredicted RBP7.78□□□□□ -1.16
TUSC3-213ENST00000515859 KRTAP5-4Q6L8H1 288 aa7.61□□□□□ -1.19
TUSC3-213ENST00000515859 LCE4AQ5TA78 99 aa7.57□□□□□ -1.2
TUSC3-213ENST00000515859 MT1AP04731 61 aa7.56□□□□□ -1.2
TUSC3-213ENST00000515859 KRTAP6-1Q3LI64 71 aa7.45□□□□□ -1.22
TUSC3-213ENST00000515859 SYNE1Q8NF91 8797 aaKnown RBP7.38□□□□□ -1.23
TUSC3-213ENST00000515859 KRTAP12-4P60329 112 aa7.37□□□□□ -1.23
TUSC3-213ENST00000515859 MT4P47944 62 aa7.34□□□□□ -1.24
TUSC3-213ENST00000515859 KRTAP4-9Q9BYQ8 210 aa7.34□□□□□ -1.24
TUSC3-213ENST00000515859 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
TUSC3-213ENST00000515859 LCE1DQ5T752 114 aa7.29□□□□□ -1.24
TUSC3-213ENST00000515859 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
TUSC3-213ENST00000515859 KRTAP9-4Q9BYQ2 154 aa7.22□□□□□ -1.25
TUSC3-213ENST00000515859 HMCN1Q96RW7 5635 aa7.18□□□□□ -1.26
TUSC3-213ENST00000515859 KRTAP20-2Q3LI61 65 aa7.12□□□□□ -1.27
TUSC3-213ENST00000515859 KRTAP6-2Q3LI66 62 aa6.93□□□□□ -1.3
TUSC3-213ENST00000515859 MT3P25713 68 aa6.89□□□□□ -1.31
TUSC3-213ENST00000515859 KRTAP5-3Q6L8H2 238 aa6.87□□□□□ -1.31
TUSC3-213ENST00000515859 KRTAP5-2Q701N4 177 aa6.84□□□□□ -1.31
TUSC3-213ENST00000515859 AHNAK2Q8IVF2 5795 aa6.51□□□□□ -1.37
TUSC3-213ENST00000515859 KRTAP4-12Q9BQ66 201 aa6.4□□□□□ -1.38
TUSC3-213ENST00000515859 LCE3DQ9BYE3 92 aa6.4□□□□□ -1.38
TUSC3-213ENST00000515859 A0A0A0MQY5 61 aa6.39□□□□□ -1.39
TUSC3-213ENST00000515859 OBSCNQ5VST9 7968 aa6.32□□□□□ -1.4
TUSC3-213ENST00000515859 KRTAP4-11Q9BYQ6 195 aa6.26□□□□□ -1.41
TUSC3-213ENST00000515859 KRTAP5-10Q6L8G5 202 aa6.25□□□□□ -1.41
TUSC3-213ENST00000515859 KRTAP9-9Q9BYP9 154 aa6.24□□□□□ -1.41
TUSC3-213ENST00000515859 LCE3EQ5T5B0 92 aa6.19□□□□□ -1.42
TUSC3-213ENST00000515859 GPR98Q8WXG9 6306 aa6.17□□□□□ -1.42
TUSC3-213ENST00000515859 LCE1EQ5T753 118 aa6.09□□□□□ -1.43
TUSC3-213ENST00000515859 INE1O15225 51 aa6.08□□□□□ -1.44
TUSC3-213ENST00000515859 KRTAP5-8O75690 187 aa6.02□□□□□ -1.45
TUSC3-213ENST00000515859 KRTAP5-1Q6L8H4 278 aa5.96□□□□□ -1.46
TUSC3-213ENST00000515859 KRTAP5-7Q6L8G8 165 aa5.88□□□□□ -1.47
TUSC3-213ENST00000515859 H3BS24 57 aa5.86□□□□□ -1.47
TUSC3-213ENST00000515859 MUC5ACP98088 5654 aa5.7□□□□□ -1.5
TUSC3-213ENST00000515859 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
TUSC3-213ENST00000515859 LCE1CQ5T751 118 aa5.65□□□□□ -1.51
TUSC3-213ENST00000515859 LCE1BQ5T7P3 118 aa5.65□□□□□ -1.51
TUSC3-213ENST00000515859 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.26□□□□□ -1.57
TUSC3-213ENST00000515859 MUC5BQ9HC84 5762 aaPredicted RBP5.22□□□□□ -1.57
TUSC3-213ENST00000515859 PRM1P04553 51 aa5.2□□□□□ -1.58
TUSC3-213ENST00000515859 AHNAKQ09666 5890 aaKnown RBP5.03□□□□□ -1.6
TUSC3-213ENST00000515859 KRTAP5-11Q6L8G4 156 aa5.02□□□□□ -1.61
TUSC3-213ENST00000515859 KRTAP21-2Q3LI59 83 aa4.9□□□□□ -1.63
TUSC3-213ENST00000515859 LCE1FQ5T754 118 aa4.66□□□□□ -1.66
TUSC3-213ENST00000515859 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
TUSC3-213ENST00000515859 PHGR1C9JFL3 82 aa4.31□□□□□ -1.72
TUSC3-213ENST00000515859 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
TUSC3-213ENST00000515859 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
TUSC3-213ENST00000515859 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 79.3 ms