RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
SDHA-219ENST00000515815 MT1MQ8N339 61 aa4.29□□□□□ -1.72
SDHA-219ENST00000515815 MT1LQ93083 61 aa4.29□□□□□ -1.72
SDHA-219ENST00000515815 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
SDHA-219ENST00000515815 UQCR11O14957 56 aa4.24□□□□□ -1.73
SDHA-219ENST00000515815 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
SDHA-219ENST00000515815 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
SDHA-219ENST00000515815 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
SDHA-219ENST00000515815 MT4P47944 62 aa4.15□□□□□ -1.75
SDHA-219ENST00000515815 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
SDHA-219ENST00000515815 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
SDHA-219ENST00000515815 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
SDHA-219ENST00000515815 K7ERS5 55 aa4.12□□□□□ -1.75
SDHA-219ENST00000515815 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
SDHA-219ENST00000515815 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.75
SDHA-219ENST00000515815 V9GYY9 64 aa4.08□□□□□ -1.76
SDHA-219ENST00000515815 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
SDHA-219ENST00000515815 PSPHP1O15172 72 aa4.04□□□□□ -1.76
SDHA-219ENST00000515815 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
SDHA-219ENST00000515815 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
SDHA-219ENST00000515815 Q1T7F1 81 aa3.99□□□□□ -1.77
SDHA-219ENST00000515815 A6NED7 52 aa3.94□□□□□ -1.78
SDHA-219ENST00000515815 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
SDHA-219ENST00000515815 KRTAP23-1A1A580 65 aa3.89□□□□□ -1.79
SDHA-219ENST00000515815 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
SDHA-219ENST00000515815 CDC42SE1Q9NRR8 79 aa3.89□□□□□ -1.79
SDHA-219ENST00000515815 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
SDHA-219ENST00000515815 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
SDHA-219ENST00000515815 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
SDHA-219ENST00000515815 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
SDHA-219ENST00000515815 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
SDHA-219ENST00000515815 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
SDHA-219ENST00000515815 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
SDHA-219ENST00000515815 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
SDHA-219ENST00000515815 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
SDHA-219ENST00000515815 ROMO1P60602 79 aa3.78□□□□□ -1.8
SDHA-219ENST00000515815 RPS28P62857 69 aaKnown RBP3.74□□□□□ -1.81
SDHA-219ENST00000515815 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
SDHA-219ENST00000515815 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
SDHA-219ENST00000515815 MT1AP04731 61 aa3.67□□□□□ -1.82
SDHA-219ENST00000515815 PCP4P48539 62 aa3.65□□□□□ -1.83
SDHA-219ENST00000515815 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
SDHA-219ENST00000515815 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
SDHA-219ENST00000515815 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
SDHA-219ENST00000515815 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
SDHA-219ENST00000515815 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
SDHA-219ENST00000515815 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
SDHA-219ENST00000515815 MT3P25713 68 aa3.33□□□□□ -1.88
SDHA-219ENST00000515815 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
SDHA-219ENST00000515815 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
SDHA-219ENST00000515815 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
SDHA-219ENST00000515815 H3BS24 57 aa3.17□□□□□ -1.9
SDHA-219ENST00000515815 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
SDHA-219ENST00000515815 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
SDHA-219ENST00000515815 PMAIP1Q13794 54 aa3.09□□□□□ -1.91
SDHA-219ENST00000515815 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
SDHA-219ENST00000515815 PRAC1Q96KF2 57 aa3□□□□□ -1.93
SDHA-219ENST00000515815 SVIPQ8NHG7 77 aa2.98□□□□□ -1.93
SDHA-219ENST00000515815 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
SDHA-219ENST00000515815 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
SDHA-219ENST00000515815 PRO0628Q9UI54 55 aa2.82□□□□□ -1.96
SDHA-219ENST00000515815 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
SDHA-219ENST00000515815 KTN1-AS1Q86SY8 53 aa2.76□□□□□ -1.97
SDHA-219ENST00000515815 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
SDHA-219ENST00000515815 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
SDHA-219ENST00000515815 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
SDHA-219ENST00000515815 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
SDHA-219ENST00000515815 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
SDHA-219ENST00000515815 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
SDHA-219ENST00000515815 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
SDHA-219ENST00000515815 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
SDHA-219ENST00000515815 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
SDHA-219ENST00000515815 NDUFAF8A1L188 74 aa2□□□□□ -2.09
SDHA-219ENST00000515815 PRM1P04553 51 aa1.94□□□□□ -2.1
SDHA-219ENST00000515815 A0A0A0MQY5 61 aa1.85□□□□□ -2.11
SDHA-219ENST00000515815 INE1O15225 51 aa1.73□□□□□ -2.13
SDHA-219ENST00000515815 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
SDHA-219ENST00000515815 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 7.2 ms