RNA–Protein interactions for RNA: ENST00000515809.1

RBM47-215, Transcript of RNA binding motif protein 47, human

TSL 2

Gene RBM47, Length 229 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM47-215	ENST00000515809	MDN1	Q9NU22	5596 aa		5.26	□□□□□ -1.57
RBM47-215	ENST00000515809	KRTAP23-1	A1A580	65 aa		5.24	□□□□□ -1.57
RBM47-215	ENST00000515809	MT1E	P04732	61 aa		5.24	□□□□□ -1.57
RBM47-215	ENST00000515809	LCE1A	Q5T7P2	110 aa		5.23	□□□□□ -1.57
RBM47-215	ENST00000515809	PP632	Q6XCG6	107 aa		5.18	□□□□□ -1.58
RBM47-215	ENST00000515809	KRTAP12-3	P60328	96 aa		5.17	□□□□□ -1.58
RBM47-215	ENST00000515809	SPRR2D	P22532	72 aa		5.13	□□□□□ -1.59
RBM47-215	ENST00000515809	KRTAP19-3	Q7Z4W3	81 aa		5.13	□□□□□ -1.59
RBM47-215	ENST00000515809	PMAIP1	Q13794	54 aa		5.12	□□□□□ -1.59
RBM47-215	ENST00000515809	PRO0628	Q9UI54	55 aa		5.09	□□□□□ -1.59
RBM47-215	ENST00000515809	LCE5A	Q5TCM9	118 aa		5.08	□□□□□ -1.6
RBM47-215	ENST00000515809	KRTAP9-9	Q9BYP9	154 aa		5.08	□□□□□ -1.6
RBM47-215	ENST00000515809	KRTAP9-4	Q9BYQ2	154 aa		5.08	□□□□□ -1.6
RBM47-215	ENST00000515809	MT1L	Q93083	61 aa		5.07	□□□□□ -1.6
RBM47-215	ENST00000515809	MT1G	P13640	62 aa		5.05	□□□□□ -1.6
RBM47-215	ENST00000515809	KRTAP20-1	Q3LI63	56 aa		5.04	□□□□□ -1.6
RBM47-215	ENST00000515809	LCE4A	Q5TA78	99 aa		5.02	□□□□□ -1.61
RBM47-215	ENST00000515809	KRTAP2-3	P0C7H8	128 aa		4.99	□□□□□ -1.61
RBM47-215	ENST00000515809	KRTAP2-4	Q9BYR9	128 aa		4.99	□□□□□ -1.61
RBM47-215	ENST00000515809	KRTAP15-1	Q3LI76	137 aa		4.96	□□□□□ -1.62
RBM47-215	ENST00000515809	MT1M	Q8N339	61 aa		4.96	□□□□□ -1.62
RBM47-215	ENST00000515809	LCE1D	Q5T752	114 aa		4.91	□□□□□ -1.62
RBM47-215	ENST00000515809	KRTAP2-2	Q9BYT5	123 aa		4.86	□□□□□ -1.63
RBM47-215	ENST00000515809	KRTAP2-1	Q9BYU5	128 aa		4.86	□□□□□ -1.63
RBM47-215	ENST00000515809	DST	Q03001	7570 aa	Known RBP	4.85	□□□□□ -1.63
RBM47-215	ENST00000515809	KRTAP4-7	Q9BYR0	210 aa		4.8	□□□□□ -1.64
RBM47-215	ENST00000515809	KTN1-AS1	Q86SY8	53 aa		4.79	□□□□□ -1.64
RBM47-215	ENST00000515809	PRAC1	Q96KF2	57 aa		4.79	□□□□□ -1.64
RBM47-215	ENST00000515809	KRTAP4-3	Q9BYR4	195 aa		4.79	□□□□□ -1.64
RBM47-215	ENST00000515809	LCE3C	Q5T5A8	94 aa		4.78	□□□□□ -1.64
RBM47-215	ENST00000515809	KRTAP4-9	Q9BYQ8	210 aa		4.7	□□□□□ -1.66
RBM47-215	ENST00000515809	SVIP	Q8NHG7	77 aa		4.58	□□□□□ -1.68
RBM47-215	ENST00000515809	KRTAP4-11	Q9BYQ6	195 aa		4.58	□□□□□ -1.68
RBM47-215	ENST00000515809	KRTAP4-2	Q9BYR5	136 aa		4.52	□□□□□ -1.69
RBM47-215	ENST00000515809	KRTAP5-4	Q6L8H1	288 aa		4.49	□□□□□ -1.69
RBM47-215	ENST00000515809	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.49	□□□□□ -1.69
RBM47-215	ENST00000515809	KRTAP9-6	A8MVA2	160 aa		4.45	□□□□□ -1.7
RBM47-215	ENST00000515809	MT4	P47944	62 aa		4.42	□□□□□ -1.7
RBM47-215	ENST00000515809	MT1A	P04731	61 aa		4.34	□□□□□ -1.71
RBM47-215	ENST00000515809	KRTAP12-4	P60329	112 aa		4.34	□□□□□ -1.71
RBM47-215	ENST00000515809	SPRR5	A0A1B0GTR4	108 aa		4.33	□□□□□ -1.72
RBM47-215	ENST00000515809	HMCN1	Q96RW7	5635 aa		4.33	□□□□□ -1.72
RBM47-215	ENST00000515809	SYNE1	Q8NF91	8797 aa	Known RBP	4.27	□□□□□ -1.73
RBM47-215	ENST00000515809	KRTAP6-1	Q3LI64	71 aa		4.25	□□□□□ -1.73
RBM47-215	ENST00000515809	KRTAP20-2	Q3LI61	65 aa		4.23	□□□□□ -1.73
RBM47-215	ENST00000515809	LUZP6	Q538Z0	58 aa		4.08	□□□□□ -1.76
RBM47-215	ENST00000515809	KRTAP5-3	Q6L8H2	238 aa		4.06	□□□□□ -1.76
RBM47-215	ENST00000515809	AHNAK2	Q8IVF2	5795 aa		4.06	□□□□□ -1.76
RBM47-215	ENST00000515809	GPR98	Q8WXG9	6306 aa		4.05	□□□□□ -1.76
RBM47-215	ENST00000515809		A0A0A0MQY5	61 aa		4.04	□□□□□ -1.76
RBM47-215	ENST00000515809	KRTAP5-2	Q701N4	177 aa		4.01	□□□□□ -1.77
RBM47-215	ENST00000515809	KRTAP6-2	Q3LI66	62 aa		4	□□□□□ -1.77
RBM47-215	ENST00000515809	MT3	P25713	68 aa		3.96	□□□□□ -1.78
RBM47-215	ENST00000515809	KRTAP5-10	Q6L8G5	202 aa		3.89	□□□□□ -1.79
RBM47-215	ENST00000515809	KRTAP5-7	Q6L8G8	165 aa		3.71	□□□□□ -1.82
RBM47-215	ENST00000515809	OBSCN	Q5VST9	7968 aa		3.69	□□□□□ -1.82
RBM47-215	ENST00000515809	NDUFAF8	A1L188	74 aa		3.62	□□□□□ -1.83
RBM47-215	ENST00000515809	KRTAP5-8	O75690	187 aa		3.62	□□□□□ -1.83
RBM47-215	ENST00000515809	LCE1E	Q5T753	118 aa		3.54	□□□□□ -1.84
RBM47-215	ENST00000515809	LCE3D	Q9BYE3	92 aa		3.54	□□□□□ -1.84
RBM47-215	ENST00000515809	KRTAP5-1	Q6L8H4	278 aa		3.51	□□□□□ -1.85
RBM47-215	ENST00000515809	MUC5AC	P98088	5654 aa		3.39	□□□□□ -1.87
RBM47-215	ENST00000515809	LCE3E	Q5T5B0	92 aa		3.39	□□□□□ -1.87
RBM47-215	ENST00000515809	LCE1B	Q5T7P3	118 aa		3.3	□□□□□ -1.88
RBM47-215	ENST00000515809	LCE1C	Q5T751	118 aa		3.28	□□□□□ -1.88
RBM47-215	ENST00000515809	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.25	□□□□□ -1.89
RBM47-215	ENST00000515809	AHNAK	Q09666	5890 aa	Known RBP	3.23	□□□□□ -1.89
RBM47-215	ENST00000515809	LCE1F	Q5T754	118 aa		3.14	□□□□□ -1.91
RBM47-215	ENST00000515809	KRTAP5-11	Q6L8G4	156 aa		3.06	□□□□□ -1.92
RBM47-215	ENST00000515809	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.03	□□□□□ -1.92
RBM47-215	ENST00000515809	INE1	O15225	51 aa		3.01	□□□□□ -1.93
RBM47-215	ENST00000515809	KRTAP21-2	Q3LI59	83 aa		2.79	□□□□□ -1.96
RBM47-215	ENST00000515809	PRM1	P04553	51 aa		2.76	□□□□□ -1.97
RBM47-215	ENST00000515809	PHGR1	C9JFL3	82 aa		2.52	□□□□□ -2.01
RBM47-215	ENST00000515809	KRTAP4-4	Q9BYR3	166 aa		2.49	□□□□□ -2.01
RBM47-215	ENST00000515809	MUC19	Q7Z5P9	8384 aa		2.24	□□□□□ -2.05
RBM47-215	ENST00000515809	KRTAP21-1	Q3LI58	79 aa		1.74	□□□□□ -2.13
RBM47-215	ENST00000515809	MUC16	Q8WXI7	14507 aa		1.67	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 103.2 ms