RNA–Protein interactions for RNA: ENST00000515580.1

GCLC-212, Transcript of glutamate-cysteine ligase catalytic subunit, humanhuman

TSL 1 (best)

Gene GCLC, Length 2,132 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLC-212ENST00000515580 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
GCLC-212ENST00000515580 MT3P25713 68 aa3.87□□□□□ -1.79
GCLC-212ENST00000515580 KRTAP19-8Q3LI54 63 aa3.86□□□□□ -1.79
GCLC-212ENST00000515580 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
GCLC-212ENST00000515580 MT1BP07438 61 aa3.84□□□□□ -1.79
GCLC-212ENST00000515580 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
GCLC-212ENST00000515580 MT1XP80297 61 aa3.69□□□□□ -1.82
GCLC-212ENST00000515580 KRTAP19-6Q3LI70 58 aa3.69□□□□□ -1.82
GCLC-212ENST00000515580 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
GCLC-212ENST00000515580 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
GCLC-212ENST00000515580 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
GCLC-212ENST00000515580 LCE3AQ5TA76 89 aa3.64□□□□□ -1.83
GCLC-212ENST00000515580 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
GCLC-212ENST00000515580 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
GCLC-212ENST00000515580 MACF1Q9UPN3 7388 aaKnown RBP3.57□□□□□ -1.84
GCLC-212ENST00000515580 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
GCLC-212ENST00000515580 SYNE2Q8WXH0 6885 aaKnown RBP3.54□□□□□ -1.84
GCLC-212ENST00000515580 KMT2DO14686 5537 aa3.53□□□□□ -1.85
GCLC-212ENST00000515580 KRTAP10-12P60413 245 aa3.52□□□□□ -1.85
GCLC-212ENST00000515580 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
GCLC-212ENST00000515580 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
GCLC-212ENST00000515580 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.86
GCLC-212ENST00000515580 MUC12Q9UKN1 5478 aa3.32□□□□□ -1.88
GCLC-212ENST00000515580 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
GCLC-212ENST00000515580 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
GCLC-212ENST00000515580 SPRR2FQ96RM1 72 aa3.3□□□□□ -1.88
GCLC-212ENST00000515580 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
GCLC-212ENST00000515580 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
GCLC-212ENST00000515580 KRTAP5-9P26371 169 aa3.26□□□□□ -1.89
GCLC-212ENST00000515580 NEBP20929 6669 aa3.25□□□□□ -1.89
GCLC-212ENST00000515580 MT1EP04732 61 aa3.24□□□□□ -1.89
GCLC-212ENST00000515580 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
GCLC-212ENST00000515580 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
GCLC-212ENST00000515580 KRTAP2-1Q9BYU5 128 aa3.2□□□□□ -1.9
GCLC-212ENST00000515580 SPRR2EP22531 72 aa3.17□□□□□ -1.9
GCLC-212ENST00000515580 SPRR2BP35325 72 aa3.17□□□□□ -1.9
GCLC-212ENST00000515580 SPRR2AP35326 72 aa3.17□□□□□ -1.9
GCLC-212ENST00000515580 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
GCLC-212ENST00000515580 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
GCLC-212ENST00000515580 MT1LQ93083 61 aa3.15□□□□□ -1.91
GCLC-212ENST00000515580 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
GCLC-212ENST00000515580 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
GCLC-212ENST00000515580 MT1GP13640 62 aa3.08□□□□□ -1.92
GCLC-212ENST00000515580 MT1MQ8N339 61 aa3.06□□□□□ -1.92
GCLC-212ENST00000515580 SPRR2DP22532 72 aa3.05□□□□□ -1.92
GCLC-212ENST00000515580 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
GCLC-212ENST00000515580 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
GCLC-212ENST00000515580 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
GCLC-212ENST00000515580 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
GCLC-212ENST00000515580 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
GCLC-212ENST00000515580 MT1AP04731 61 aa2.68□□□□□ -1.98
GCLC-212ENST00000515580 MT4P47944 62 aa2.67□□□□□ -1.98
GCLC-212ENST00000515580 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
GCLC-212ENST00000515580 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.98
GCLC-212ENST00000515580 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
GCLC-212ENST00000515580 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
GCLC-212ENST00000515580 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
GCLC-212ENST00000515580 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
GCLC-212ENST00000515580 PRM1P04553 51 aa2.52□□□□□ -2.01
GCLC-212ENST00000515580 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
GCLC-212ENST00000515580 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
GCLC-212ENST00000515580 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
GCLC-212ENST00000515580 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
GCLC-212ENST00000515580 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
GCLC-212ENST00000515580 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.03
GCLC-212ENST00000515580 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
GCLC-212ENST00000515580 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
GCLC-212ENST00000515580 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
GCLC-212ENST00000515580 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
GCLC-212ENST00000515580 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
GCLC-212ENST00000515580 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
GCLC-212ENST00000515580 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
GCLC-212ENST00000515580 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
GCLC-212ENST00000515580 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
GCLC-212ENST00000515580 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
GCLC-212ENST00000515580 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
GCLC-212ENST00000515580 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
GCLC-212ENST00000515580 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 58.1 ms