RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
SUB1-213ENST00000515355 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
SUB1-213ENST00000515355 PSPHP1O15172 72 aa4.35□□□□□ -1.71
SUB1-213ENST00000515355 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.71
SUB1-213ENST00000515355 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
SUB1-213ENST00000515355 C10orf95Q9H7T3 257 aa4.33□□□□□ -1.72
SUB1-213ENST00000515355 V9GYY9 64 aa4.33□□□□□ -1.72
SUB1-213ENST00000515355 TNP1P09430 55 aa4.32□□□□□ -1.72
SUB1-213ENST00000515355 PCP4P48539 62 aa4.29□□□□□ -1.72
SUB1-213ENST00000515355 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
SUB1-213ENST00000515355 Q1T7F1 81 aa4.28□□□□□ -1.72
SUB1-213ENST00000515355 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
SUB1-213ENST00000515355 K7ERS5 55 aa4.26□□□□□ -1.73
SUB1-213ENST00000515355 MT1EP04732 61 aa4.26□□□□□ -1.73
SUB1-213ENST00000515355 LCE3AQ5TA76 89 aa4.24□□□□□ -1.73
SUB1-213ENST00000515355 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
SUB1-213ENST00000515355 A6NED7 52 aa4.22□□□□□ -1.73
SUB1-213ENST00000515355 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
SUB1-213ENST00000515355 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
SUB1-213ENST00000515355 RPS28P62857 69 aaKnown RBP4.15□□□□□ -1.75
SUB1-213ENST00000515355 MT1GP13640 62 aa4.11□□□□□ -1.75
SUB1-213ENST00000515355 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
SUB1-213ENST00000515355 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
SUB1-213ENST00000515355 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
SUB1-213ENST00000515355 MT1LQ93083 61 aa4.1□□□□□ -1.75
SUB1-213ENST00000515355 KRTAP12-3P60328 96 aa4.07□□□□□ -1.76
SUB1-213ENST00000515355 MT1MQ8N339 61 aa4.06□□□□□ -1.76
SUB1-213ENST00000515355 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.76
SUB1-213ENST00000515355 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
SUB1-213ENST00000515355 ROMO1P60602 79 aa3.96□□□□□ -1.78
SUB1-213ENST00000515355 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
SUB1-213ENST00000515355 MT4P47944 62 aa3.86□□□□□ -1.79
SUB1-213ENST00000515355 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
SUB1-213ENST00000515355 MT3P25713 68 aa3.8□□□□□ -1.8
SUB1-213ENST00000515355 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
SUB1-213ENST00000515355 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
SUB1-213ENST00000515355 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
SUB1-213ENST00000515355 HMCN1Q96RW7 5635 aa3.74□□□□□ -1.81
SUB1-213ENST00000515355 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
SUB1-213ENST00000515355 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
SUB1-213ENST00000515355 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.83
SUB1-213ENST00000515355 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
SUB1-213ENST00000515355 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
SUB1-213ENST00000515355 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
SUB1-213ENST00000515355 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
SUB1-213ENST00000515355 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
SUB1-213ENST00000515355 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
SUB1-213ENST00000515355 MT1AP04731 61 aa3.48□□□□□ -1.85
SUB1-213ENST00000515355 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
SUB1-213ENST00000515355 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
SUB1-213ENST00000515355 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
SUB1-213ENST00000515355 PRAC1Q96KF2 57 aa3.4□□□□□ -1.87
SUB1-213ENST00000515355 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
SUB1-213ENST00000515355 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
SUB1-213ENST00000515355 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
SUB1-213ENST00000515355 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
SUB1-213ENST00000515355 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
SUB1-213ENST00000515355 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
SUB1-213ENST00000515355 SVIPQ8NHG7 77 aa3.12□□□□□ -1.91
SUB1-213ENST00000515355 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
SUB1-213ENST00000515355 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
SUB1-213ENST00000515355 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
SUB1-213ENST00000515355 MUC5ACP98088 5654 aa2.9□□□□□ -1.94
SUB1-213ENST00000515355 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
SUB1-213ENST00000515355 LUZP6Q538Z0 58 aa2.86□□□□□ -1.95
SUB1-213ENST00000515355 A0A0A0MQY5 61 aa2.81□□□□□ -1.96
SUB1-213ENST00000515355 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
SUB1-213ENST00000515355 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
SUB1-213ENST00000515355 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
SUB1-213ENST00000515355 NDUFAF8A1L188 74 aa2.58□□□□□ -2
SUB1-213ENST00000515355 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SUB1-213ENST00000515355 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SUB1-213ENST00000515355 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
SUB1-213ENST00000515355 PRM1P04553 51 aa2.06□□□□□ -2.08
SUB1-213ENST00000515355 INE1O15225 51 aa1.88□□□□□ -2.11
SUB1-213ENST00000515355 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
SUB1-213ENST00000515355 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms