RNA–Protein interactions for RNA: ENST00000515324.1

PDE4D-224, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-224ENST00000515324 MACF1Q9UPN3 7388 aaKnown RBP2.28□□□□□ -2.05
PDE4D-224ENST00000515324 SERP1Q9Y6X1 66 aa2.26□□□□□ -2.05
PDE4D-224ENST00000515324 SYNE2Q8WXH0 6885 aaKnown RBP2.26□□□□□ -2.05
PDE4D-224ENST00000515324 PMAIP1Q13794 54 aa2.24□□□□□ -2.05
PDE4D-224ENST00000515324 SPATA8Q6RVD6 105 aa2.24□□□□□ -2.05
PDE4D-224ENST00000515324 A0A0D9SG42 100 aa2.22□□□□□ -2.05
PDE4D-224ENST00000515324 KRTAP5-9P26371 169 aa2.22□□□□□ -2.05
PDE4D-224ENST00000515324 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
PDE4D-224ENST00000515324 A0A1B0GU69 56 aa2.21□□□□□ -2.06
PDE4D-224ENST00000515324 TMEM258P61165 79 aa2.21□□□□□ -2.06
PDE4D-224ENST00000515324 ATP5EP56381 51 aaPredicted RBP2.2□□□□□ -2.06
PDE4D-224ENST00000515324 KRTAP8-1Q8IUC2 63 aa2.19□□□□□ -2.06
PDE4D-224ENST00000515324 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
PDE4D-224ENST00000515324 KRTAP12-1P59990 96 aa2.17□□□□□ -2.06
PDE4D-224ENST00000515324 KMT2DO14686 5537 aa2.16□□□□□ -2.06
PDE4D-224ENST00000515324 LINC01558Q9Y6Z2 57 aa2.16□□□□□ -2.06
PDE4D-224ENST00000515324 SPRR2EP22531 72 aa2.14□□□□□ -2.07
PDE4D-224ENST00000515324 SPRR2BP35325 72 aa2.14□□□□□ -2.07
PDE4D-224ENST00000515324 SPRR2AP35326 72 aa2.14□□□□□ -2.07
PDE4D-224ENST00000515324 KTN1-AS1Q86SY8 53 aa2.14□□□□□ -2.07
PDE4D-224ENST00000515324 PRR15LQ9BU68 103 aa2.14□□□□□ -2.07
PDE4D-224ENST00000515324 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
PDE4D-224ENST00000515324 KRTAP5-4Q6L8H1 288 aa2.11□□□□□ -2.07
PDE4D-224ENST00000515324 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
PDE4D-224ENST00000515324 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
PDE4D-224ENST00000515324 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
PDE4D-224ENST00000515324 NEBP20929 6669 aa2.08□□□□□ -2.08
PDE4D-224ENST00000515324 UQCR11O14957 56 aa2.08□□□□□ -2.08
PDE4D-224ENST00000515324 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
PDE4D-224ENST00000515324 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
PDE4D-224ENST00000515324 KRTAP19-7Q3SYF9 63 aa2.07□□□□□ -2.08
PDE4D-224ENST00000515324 SPRR2DP22532 72 aa2.06□□□□□ -2.08
PDE4D-224ENST00000515324 Q1T7F1 81 aa2.06□□□□□ -2.08
PDE4D-224ENST00000515324 MIR22HGQ0VDD5 57 aa2.05□□□□□ -2.08
PDE4D-224ENST00000515324 MT1EP04732 61 aa2.04□□□□□ -2.08
PDE4D-224ENST00000515324 KRTAP19-5Q3LI72 72 aa2.04□□□□□ -2.08
PDE4D-224ENST00000515324 MDN1Q9NU22 5596 aa2.04□□□□□ -2.08
PDE4D-224ENST00000515324 TNP1P09430 55 aa2.03□□□□□ -2.08
PDE4D-224ENST00000515324 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
PDE4D-224ENST00000515324 KRTAP19-3Q7Z4W3 81 aa2.01□□□□□ -2.09
PDE4D-224ENST00000515324 KRTAP2-1Q9BYU5 128 aa2.01□□□□□ -2.09
PDE4D-224ENST00000515324 RPS28P62857 69 aaKnown RBP2□□□□□ -2.09
PDE4D-224ENST00000515324 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
PDE4D-224ENST00000515324 OBSCNQ5VST9 7968 aa1.98□□□□□ -2.09
PDE4D-224ENST00000515324 MT1GP13640 62 aa1.97□□□□□ -2.09
PDE4D-224ENST00000515324 MT1LQ93083 61 aa1.96□□□□□ -2.1
PDE4D-224ENST00000515324 MT1MQ8N339 61 aa1.95□□□□□ -2.1
PDE4D-224ENST00000515324 KRTAP4-3Q9BYR4 195 aa1.94□□□□□ -2.1
PDE4D-224ENST00000515324 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
PDE4D-224ENST00000515324 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
PDE4D-224ENST00000515324 CDC42SE1Q9NRR8 79 aa1.9□□□□□ -2.11
PDE4D-224ENST00000515324 ROMO1P60602 79 aa1.87□□□□□ -2.11
PDE4D-224ENST00000515324 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
PDE4D-224ENST00000515324 MT4P47944 62 aa1.82□□□□□ -2.12
PDE4D-224ENST00000515324 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
PDE4D-224ENST00000515324 BRK1Q8WUW1 75 aa1.77□□□□□ -2.13
PDE4D-224ENST00000515324 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
PDE4D-224ENST00000515324 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
PDE4D-224ENST00000515324 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
PDE4D-224ENST00000515324 MT1AP04731 61 aa1.67□□□□□ -2.14
PDE4D-224ENST00000515324 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
PDE4D-224ENST00000515324 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
PDE4D-224ENST00000515324 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
PDE4D-224ENST00000515324 INE1O15225 51 aa1.58□□□□□ -2.16
PDE4D-224ENST00000515324 KRTAP6-2Q3LI66 62 aa1.58□□□□□ -2.16
PDE4D-224ENST00000515324 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
PDE4D-224ENST00000515324 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
PDE4D-224ENST00000515324 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
PDE4D-224ENST00000515324 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
PDE4D-224ENST00000515324 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
PDE4D-224ENST00000515324 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
PDE4D-224ENST00000515324 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
PDE4D-224ENST00000515324 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
PDE4D-224ENST00000515324 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
PDE4D-224ENST00000515324 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
PDE4D-224ENST00000515324 PRM1P04553 51 aa0.98□□□□□ -2.25
PDE4D-224ENST00000515324 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
PDE4D-224ENST00000515324 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 72.6 ms