RNA–Protein interactions for RNA: ENST00000515183.5

SH3BP2-227, Transcript of SH3 domain binding protein 2, humanhuman

TSL 4

Gene SH3BP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-227ENST00000515183 TMEM258P61165 79 aa5.01□□□□□ -1.61
SH3BP2-227ENST00000515183 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
SH3BP2-227ENST00000515183 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
SH3BP2-227ENST00000515183 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
SH3BP2-227ENST00000515183 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
SH3BP2-227ENST00000515183 MT4P47944 62 aa4.96□□□□□ -1.62
SH3BP2-227ENST00000515183 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
SH3BP2-227ENST00000515183 MIR22HGQ0VDD5 57 aa4.88□□□□□ -1.63
SH3BP2-227ENST00000515183 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
SH3BP2-227ENST00000515183 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
SH3BP2-227ENST00000515183 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
SH3BP2-227ENST00000515183 K7ERS5 55 aa4.83□□□□□ -1.64
SH3BP2-227ENST00000515183 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
SH3BP2-227ENST00000515183 AHNAK2Q8IVF2 5795 aa4.78□□□□□ -1.64
SH3BP2-227ENST00000515183 V9GYY9 64 aa4.77□□□□□ -1.65
SH3BP2-227ENST00000515183 PSPHP1O15172 72 aa4.76□□□□□ -1.65
SH3BP2-227ENST00000515183 Q1T7F1 81 aa4.71□□□□□ -1.66
SH3BP2-227ENST00000515183 PCP4P48539 62 aa4.69□□□□□ -1.66
SH3BP2-227ENST00000515183 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
SH3BP2-227ENST00000515183 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
SH3BP2-227ENST00000515183 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
SH3BP2-227ENST00000515183 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
SH3BP2-227ENST00000515183 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
SH3BP2-227ENST00000515183 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
SH3BP2-227ENST00000515183 A6NED7 52 aa4.61□□□□□ -1.67
SH3BP2-227ENST00000515183 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
SH3BP2-227ENST00000515183 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
SH3BP2-227ENST00000515183 SPRR5A0A1B0GTR4 108 aa4.59□□□□□ -1.67
SH3BP2-227ENST00000515183 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
SH3BP2-227ENST00000515183 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
SH3BP2-227ENST00000515183 CDC42SE1Q9NRR8 79 aa4.55□□□□□ -1.68
SH3BP2-227ENST00000515183 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
SH3BP2-227ENST00000515183 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
SH3BP2-227ENST00000515183 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
SH3BP2-227ENST00000515183 ROMO1P60602 79 aa4.47□□□□□ -1.69
SH3BP2-227ENST00000515183 MT1AP04731 61 aa4.34□□□□□ -1.71
SH3BP2-227ENST00000515183 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
SH3BP2-227ENST00000515183 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
SH3BP2-227ENST00000515183 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
SH3BP2-227ENST00000515183 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
SH3BP2-227ENST00000515183 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.74
SH3BP2-227ENST00000515183 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
SH3BP2-227ENST00000515183 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
SH3BP2-227ENST00000515183 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
SH3BP2-227ENST00000515183 BRK1Q8WUW1 75 aa4.01□□□□□ -1.77
SH3BP2-227ENST00000515183 MT3P25713 68 aa4□□□□□ -1.77
SH3BP2-227ENST00000515183 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
SH3BP2-227ENST00000515183 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
SH3BP2-227ENST00000515183 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.78
SH3BP2-227ENST00000515183 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
SH3BP2-227ENST00000515183 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
SH3BP2-227ENST00000515183 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
SH3BP2-227ENST00000515183 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
SH3BP2-227ENST00000515183 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
SH3BP2-227ENST00000515183 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
SH3BP2-227ENST00000515183 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SH3BP2-227ENST00000515183 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
SH3BP2-227ENST00000515183 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
SH3BP2-227ENST00000515183 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
SH3BP2-227ENST00000515183 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
SH3BP2-227ENST00000515183 SVIPQ8NHG7 77 aa3.23□□□□□ -1.89
SH3BP2-227ENST00000515183 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
SH3BP2-227ENST00000515183 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
SH3BP2-227ENST00000515183 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
SH3BP2-227ENST00000515183 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
SH3BP2-227ENST00000515183 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
SH3BP2-227ENST00000515183 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
SH3BP2-227ENST00000515183 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
SH3BP2-227ENST00000515183 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
SH3BP2-227ENST00000515183 H3BS24 57 aa2.72□□□□□ -1.97
SH3BP2-227ENST00000515183 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
SH3BP2-227ENST00000515183 NDUFAF8A1L188 74 aa2.58□□□□□ -2
SH3BP2-227ENST00000515183 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
SH3BP2-227ENST00000515183 PRM1P04553 51 aa2.28□□□□□ -2.04
SH3BP2-227ENST00000515183 A0A0A0MQY5 61 aa2.27□□□□□ -2.05
SH3BP2-227ENST00000515183 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
SH3BP2-227ENST00000515183 INE1O15225 51 aa2.02□□□□□ -2.09
SH3BP2-227ENST00000515183 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 123.5 ms