RNA–Protein interactions for RNA: ENST00000514782.5

RBM47-213, Transcript of RNA binding motif protein 47, humanhuman

TSL 3

Gene RBM47, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-213ENST00000514782 LCE1DQ5T752 114 aa6.85□□□□□ -1.31
RBM47-213ENST00000514782 MT4P47944 62 aa6.79□□□□□ -1.32
RBM47-213ENST00000514782 LCE4AQ5TA78 99 aa6.79□□□□□ -1.32
RBM47-213ENST00000514782 KRTAP4-3Q9BYR4 195 aa6.77□□□□□ -1.33
RBM47-213ENST00000514782 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
RBM47-213ENST00000514782 HMCN1Q96RW7 5635 aa6.73□□□□□ -1.33
RBM47-213ENST00000514782 KRTAP5-4Q6L8H1 288 aa6.64□□□□□ -1.35
RBM47-213ENST00000514782 UQCR11O14957 56 aa6.63□□□□□ -1.35
RBM47-213ENST00000514782 KRTAP12-3P60328 96 aa6.61□□□□□ -1.35
RBM47-213ENST00000514782 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
RBM47-213ENST00000514782 AHNAK2Q8IVF2 5795 aa6.55□□□□□ -1.36
RBM47-213ENST00000514782 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
RBM47-213ENST00000514782 RPS28P62857 69 aaKnown RBP6.51□□□□□ -1.37
RBM47-213ENST00000514782 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
RBM47-213ENST00000514782 MIR22HGQ0VDD5 57 aa6.44□□□□□ -1.38
RBM47-213ENST00000514782 Q1T7F1 81 aa6.42□□□□□ -1.38
RBM47-213ENST00000514782 V9GYY9 64 aa6.4□□□□□ -1.38
RBM47-213ENST00000514782 KRTAP5-10Q6L8G5 202 aa6.39□□□□□ -1.39
RBM47-213ENST00000514782 K7ERS5 55 aa6.38□□□□□ -1.39
RBM47-213ENST00000514782 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
RBM47-213ENST00000514782 KRTAP5-5Q701N2 237 aaPredicted RBP6.33□□□□□ -1.4
RBM47-213ENST00000514782 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
RBM47-213ENST00000514782 KRTAP20-2Q3LI61 65 aa6.28□□□□□ -1.4
RBM47-213ENST00000514782 PSPHP1O15172 72 aa6.27□□□□□ -1.41
RBM47-213ENST00000514782 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
RBM47-213ENST00000514782 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
RBM47-213ENST00000514782 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
RBM47-213ENST00000514782 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
RBM47-213ENST00000514782 KRTAP5-7Q6L8G8 165 aa6.15□□□□□ -1.42
RBM47-213ENST00000514782 SYNE1Q8NF91 8797 aaKnown RBP6.14□□□□□ -1.43
RBM47-213ENST00000514782 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
RBM47-213ENST00000514782 A6NED7 52 aa6.08□□□□□ -1.44
RBM47-213ENST00000514782 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
RBM47-213ENST00000514782 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
RBM47-213ENST00000514782 ROMO1P60602 79 aa5.9□□□□□ -1.46
RBM47-213ENST00000514782 MT1AP04731 61 aa5.87□□□□□ -1.47
RBM47-213ENST00000514782 KRTAP6-1Q3LI64 71 aa5.85□□□□□ -1.47
RBM47-213ENST00000514782 SVIPQ8NHG7 77 aa5.84□□□□□ -1.47
RBM47-213ENST00000514782 KRTAP5-2Q701N4 177 aa5.8□□□□□ -1.48
RBM47-213ENST00000514782 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
RBM47-213ENST00000514782 BRK1Q8WUW1 75 aa5.74□□□□□ -1.49
RBM47-213ENST00000514782 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
RBM47-213ENST00000514782 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
RBM47-213ENST00000514782 KRTAP6-2Q3LI66 62 aa5.62□□□□□ -1.51
RBM47-213ENST00000514782 KRTAP5-8O75690 187 aa5.56□□□□□ -1.52
RBM47-213ENST00000514782 PRO0628Q9UI54 55 aa5.48□□□□□ -1.53
RBM47-213ENST00000514782 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
RBM47-213ENST00000514782 AHNAKQ09666 5890 aaKnown RBP5.43□□□□□ -1.54
RBM47-213ENST00000514782 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
RBM47-213ENST00000514782 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
RBM47-213ENST00000514782 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
RBM47-213ENST00000514782 MT3P25713 68 aa5.38□□□□□ -1.55
RBM47-213ENST00000514782 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
RBM47-213ENST00000514782 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
RBM47-213ENST00000514782 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
RBM47-213ENST00000514782 KTN1-AS1Q86SY8 53 aa5.12□□□□□ -1.59
RBM47-213ENST00000514782 LCE1EQ5T753 118 aa5□□□□□ -1.61
RBM47-213ENST00000514782 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
RBM47-213ENST00000514782 KRTAP4-2Q9BYR5 136 aa4.68□□□□□ -1.66
RBM47-213ENST00000514782 LCE1CQ5T751 118 aa4.63□□□□□ -1.67
RBM47-213ENST00000514782 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
RBM47-213ENST00000514782 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
RBM47-213ENST00000514782 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
RBM47-213ENST00000514782 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
RBM47-213ENST00000514782 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
RBM47-213ENST00000514782 H3BS24 57 aa4.18□□□□□ -1.74
RBM47-213ENST00000514782 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
RBM47-213ENST00000514782 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
RBM47-213ENST00000514782 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
RBM47-213ENST00000514782 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
RBM47-213ENST00000514782 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
RBM47-213ENST00000514782 PHGR1C9JFL3 82 aa3.77□□□□□ -1.81
RBM47-213ENST00000514782 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
RBM47-213ENST00000514782 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
RBM47-213ENST00000514782 INE1O15225 51 aa3.21□□□□□ -1.9
RBM47-213ENST00000514782 PRM1P04553 51 aa3.01□□□□□ -1.93
RBM47-213ENST00000514782 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
RBM47-213ENST00000514782 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 199.4 ms